RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SLC25A28Q96A46 364 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 PYURFQ96I23 114 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 MEGF10Q96KG7 1140 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 SIGLEC11Q96RL6 698 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 PITX2Q99697 317 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 SLC30A2Q9BRI3 323 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 IFT27Q9BW83 186 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 SSBP3Q9BWW4 388 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 MS4A7Q9GZW8 240 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 NOP16Q9Y3C1 178 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 PPIAL4AQ9Y536 164 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 LHFPL6Q9Y693 200 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 ARHGAP32A7KAX9 2087 aa11.44□□□□□ -0.58
SNRPA1-204ENST00000558020 CEACAM18A8MTB9 384 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 IQCF6A8MYZ5 107 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 F5H0A9 414 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 PPP1R3DO95685 299 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 HLA-DQA2P01906 255 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 RPS2P15880 293 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 GNB2P62879 340 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 BAMBIQ13145 260 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 SEC23BQ15437 767 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 ZNF181Q2M3W8 571 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 AWAT1Q58HT5 328 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 OTPQ5XKR4 325 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 LEG1Q6P5S2 330 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 OR6V1Q8N148 313 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 BHLHE23Q8NDY6 225 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 OR10AD1Q8NGE0 317 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 OR52E2Q8NGJ4 325 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 OR11L1Q8NGX0 322 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 FANK1Q8TC84 345 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 ERGIC1Q969X5 290 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 NEIL1Q96FI4 390 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 DHRS1Q96LJ7 313 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 TSSK2Q96PF2 358 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 NMNAT3Q96T66 252 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 ELAC2Q9BQ52 826 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 TMEM165Q9HC07 324 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 ESM1Q9NQ30 184 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 ZNF446Q9NWS9 450 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 MAGEL2Q9UJ55 1249 aa11.43□□□□□ -0.58
SNRPA1-204ENST00000558020 IGLV1-36A0A0B4J1U3 117 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 F5H5K5 113 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 OR10H3O60404 316 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 DIRAS1O95057 198 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 LCATP04180 440 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 HKR1P10072 659 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 ZNF823P16415 610 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 FPR3P25089 353 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 RAD23AP54725 363 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 TPTEP56180 551 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 FXYD6P3P58550 94 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SEC61A1P61619 476 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SPIBQ01892 262 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 PAX8Q06710 450 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 CORO6Q6QEF8 472 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SHISA2Q6UWI4 295 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 COLCA1Q6ZS62 124 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 MOGAT3Q86VF5 341 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 CELF2-AS1Q8N7Q2 184 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SLC26A10Q8NG04 563 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 OR8B3Q8NGG8 313 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 OR4K13Q8NH42 304 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SPRYD4Q8WW59 207 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 RAB40AQ8WXH6 277 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SPTSSAQ969W0 71 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 OR8B2Q96RD0 313 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 ATF6BQ99941 703 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 SLC22A4Q9H015 551 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 OR52D1Q9H346 318 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 ZNF69Q9UC07 566 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 KCNG2Q9UJ96 466 aa11.42□□□□□ -0.58
SNRPA1-204ENST00000558020 F5H5P2 479 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 DCTN6O00399 190 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 CYB5R3P00387 301 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 HIST1H1CP16403 213 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 CD80P33681 288 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 ERFP50548 548 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 KCNJ8Q15842 424 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 MEP1BQ16820 701 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 SAMD4BQ5PRF9 694 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 SLC18B1Q6NT16 456 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 RPL13AP3Q6NVV1 102 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 PGAP1Q75T13 922 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 ZBTB46Q86UZ6 589 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 KLBQ86Z14 1044 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 LINC00471Q8N535 108 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 RNF148Q8N7C7 305 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 ZNF420Q8TAQ5 688 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 GNPDA2Q8TDQ7 276 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 FUZQ9BT04 418 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 ZNF747Q9BV97 191 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 NSRP1Q9H0G5 558 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 MYLK2Q9H1R3 596 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 RPRD1BQ9NQG5 326 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 CYB5R1Q9UHQ9 305 aa11.41□□□□□ -0.58
SNRPA1-204ENST00000558020 KIR2DS1A0A191URI9 304 aa11.4□□□□□ -0.58
SNRPA1-204ENST00000558020 A0A1B0GWJ7 208 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms