RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 GFOD2Q3B7J2 385 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 OR51E1Q8TCB6 317 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 SLAMF6Q96DU3 332 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 SELENOIQ9C0D9 397 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 SLC7A5P2Q9GIP4 190 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 SLC17A5Q9NRA2 495 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 PRR13Q9NZ81 148 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 ZNF319Q9P2F9 582 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
LDLR-207ENST00000558013 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 OR2AT4A6NND4 320 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 PMS2P2O95744 297 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 IGHMP01871 453 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 VSIG8P0DPA2 414 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 FSTP19883 344 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 HRH1P35367 487 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 CAPZA1P52907 286 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 ATP1B3P54709 279 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 ZNF584Q8IVC4 421 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 SPERTQ8NA61 448 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 TMEM104Q8NE00 496 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 FN3KRPQ9HA64 309 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 FAM206AQ9NX38 181 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 RFPL4AA6NLU0 287 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 RFPL4AL1F8VTS6 287 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 DUX1O43812 170 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 TPPPO94811 219 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 GIMD1P0DJR0 217 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 ZNF260Q3ZCT1 412 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 ZNF574Q6ZN55 896 aaPredicted RBP11.46□□□□□ -0.57
LDLR-207ENST00000558013 OR5M9Q8NGP3 310 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 OIT3Q8WWZ8 545 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 PDCD10Q9BUL8 212 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 CHRNA10Q9GZZ6 450 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 RAB33BQ9H082 229 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 B3GAT1Q9P2W7 334 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 KCNK7Q9Y2U2 307 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 TRIOBPQ9H2D6 2365 aa11.46□□□□□ -0.57
LDLR-207ENST00000558013 AKR1C4P17516 323 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 ZP3P21754 424 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 CD34P28906 385 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 CD96P40200 585 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 GMFBP60983 142 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 KCTD9Q7L273 389 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 CDH26Q8IXH8 852 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 PPP1R1CQ8WVI7 109 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 PBOV1Q9GZY1 135 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 ALX4Q9H161 411 aaPredicted RBP11.46□□□□□ -0.58
LDLR-207ENST00000558013 SERINC1Q9NRX5 453 aa11.46□□□□□ -0.58
LDLR-207ENST00000558013 TNRC18O15417 2968 aaPredicted RBP11.45□□□□□ -0.58
LDLR-207ENST00000558013 TRBV11-1A0A0K0K1C0 115 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 A8MXK9 166 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 CDK2AP1O14519 115 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 SYT7O43581 403 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 PMP2P02689 132 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 VAMP1P23763 118 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 LUMP51884 338 aaPredicted RBP11.45□□□□□ -0.58
LDLR-207ENST00000558013 MYBPHQ13203 477 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 LCN10Q6JVE6 187 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 COMMD2Q86X83 199 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 OR10G3Q8NGC4 313 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 AQP3Q92482 292 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 ZBTB8AQ96BR9 441 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 BANF2Q9H503 90 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 KLRF1Q9NZS2 232 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 CD74P04233 296 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 ISG15P05161 165 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 DCNP07585 359 aaKnown RBP11.45□□□□□ -0.58
LDLR-207ENST00000558013 CD37P11049 281 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 RPA2P15927 270 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 BDKRB2P30411 391 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 PCK2Q16822 640 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 RNASE10Q5GAN6 216 aaKnown RBP11.45□□□□□ -0.58
LDLR-207ENST00000558013 ELP2Q6IA86 826 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 ANGPTL5Q86XS5 388 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 BVESQ8NE79 360 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 SLC25A21Q9BQT8 299 aaPredicted RBP11.45□□□□□ -0.58
LDLR-207ENST00000558013 CHST11Q9NPF2 352 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 FSCN3Q9NQT6 498 aa11.45□□□□□ -0.58
LDLR-207ENST00000558013 LOC390937A0A1W2PQ73 354 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 LIPT2A6NK58 231 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 TTLL8A6PVC2 850 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 EEF1E1-BLOC1S5C9J1V9 151 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 E9PLN8 166 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 RER1O15258 196 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 NUDT21O43809 227 aaKnown RBP11.44□□□□□ -0.58
LDLR-207ENST00000558013 FOSL2P15408 326 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 PI3P19957 117 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 SFTPDP35247 375 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 ZNF704Q6ZNC4 412 aaPredicted RBP11.44□□□□□ -0.58
LDLR-207ENST00000558013 TMPPEQ6ZT21 453 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 ANKRD37Q7Z713 158 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 PDZD9Q8IXQ8 264 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 NFAM1Q8NET5 270 aaPredicted RBP11.44□□□□□ -0.58
LDLR-207ENST00000558013 OR5M8Q8NGP6 311 aa11.44□□□□□ -0.58
LDLR-207ENST00000558013 OR6K3Q8NGY3 331 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms