RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
USP3-205ENST00000557884 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
USP3-205ENST00000557884 N6AMT1Q9Y5N5 214 aa12.3□□□□□ -0.44
USP3-205ENST00000557884 USF3Q68DE3 2245 aa12.3□□□□□ -0.44
USP3-205ENST00000557884 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
USP3-205ENST00000557884 ICMTO60725 284 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 LCATP04180 440 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 LYNP07948 512 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 SLC2A1P11166 492 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 PAX1P15863 534 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 HTR1FP30939 366 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 RGS6P49758 472 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 HLXQ14774 488 aaPredicted RBP12.29□□□□□ -0.44
USP3-205ENST00000557884 TESK1Q15569 626 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 NKPD1Q17RQ9 610 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 TMEM255AQ5JRV8 349 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 LRRC75A-AS1Q8N1F1 130 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 ZNF555Q8NEP9 628 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 KLF14Q8TD94 323 aaPredicted RBP12.29□□□□□ -0.44
USP3-205ENST00000557884 RNF133Q8WVZ7 376 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 TRUB1Q8WWH5 349 aaKnown RBP12.29□□□□□ -0.44
USP3-205ENST00000557884 GTF3AQ92664 365 aaKnown RBP12.29□□□□□ -0.44
USP3-205ENST00000557884 RDH12Q96NR8 316 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 SORCS2Q96PQ0 1159 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 YIPF3Q9GZM5 350 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 CXXC4Q9H2H0 198 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 TPK1Q9H3S4 243 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 ADGRL4Q9HBW9 690 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 C8orf4Q9NR00 106 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 COPS3Q9UNS2 423 aa12.29□□□□□ -0.44
USP3-205ENST00000557884 DSCAMO60469 2012 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 H7C417 338 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 M0R233 179 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 PSMD9O00233 223 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 SLC16A6O15403 523 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 LY6HO94772 140 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 CLIC3O95833 236 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 H2BFMP0C1H6 154 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 NAT2P11245 290 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 ANOS1P23352 680 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 HSD11B1P28845 292 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 OPRL1P41146 370 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 CX3CR1P49238 355 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 EVX1P49640 407 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 PRSS12P56730 875 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 SNRPGP62308 76 aaKnown RBP12.28□□□□□ -0.44
USP3-205ENST00000557884 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
USP3-205ENST00000557884 LRRN1Q6UXK5 716 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 KRTAP1-3Q8IUG1 177 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 SLC35F2Q8IXU6 374 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 ENTHD1Q8IYW4 607 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 RFLNBQ8N5W9 214 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 ZNF283Q8N7M2 679 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 NRG4Q8WWG1 115 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 RFKQ969G6 155 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 APOBEC3DQ96AK3 386 aaPredicted RBP12.28□□□□□ -0.44
USP3-205ENST00000557884 CMBLQ96DG6 245 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 TBX5Q99593 518 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 KCNJ15Q99712 375 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 C1QTNF5Q9BXJ0 243 aa12.28□□□□□ -0.44
USP3-205ENST00000557884 WARS2Q9UGM6 360 aaKnown RBP12.28□□□□□ -0.44
USP3-205ENST00000557884 RTTNQ86VV8 2226 aa12.27□□□□□ -0.44
USP3-205ENST00000557884 IGLV3-9A0A075B6K5 115 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 PRR32B1ATL7 298 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 SSX4O60224 188 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 ANXA2P07355 339 aaKnown RBP12.27□□□□□ -0.45
USP3-205ENST00000557884 SBK2P0C263 348 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 ALOX5APP20292 161 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 SLC15A1P46059 708 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 PPOXP50336 477 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 NUDT6P53370 316 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 GRB2P62993 217 aaKnown RBP12.27□□□□□ -0.45
USP3-205ENST00000557884 PSG7Q13046 419 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.27□□□□□ -0.45
USP3-205ENST00000557884 C1orf174Q8IYL3 243 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 DHRSXQ8N5I4 330 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 WFDC11Q8NEX6 87 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 SNX33Q8WV41 574 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 RNFT2Q96EX2 444 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 VCXQ9H320 206 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 BRD7Q9NPI1 651 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 SLCO1C1Q9NYB5 712 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 HAO2Q9NYQ3 351 aa12.27□□□□□ -0.45
USP3-205ENST00000557884 ITPR3Q14573 2671 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 H3BSA7 217 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
USP3-205ENST00000557884 GABRB1P18505 474 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 OTX1P32242 354 aaPredicted RBP12.26□□□□□ -0.45
USP3-205ENST00000557884 IL5RAQ01344 420 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 OCLNQ16625 522 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 COLCA1Q6ZS62 124 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 KRT77Q7Z794 578 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 OR5AS1Q8N127 324 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms