RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 OR1F12Q8NHA8 337 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF671Q8TAW3 534 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 WNT2BQ93097 391 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 GFI1Q99684 422 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 SP140LQ9H930 580 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 SPATA2Q9UM82 520 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 H3BSH0 61 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 M0R135 149 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 TBX1O43435 398 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 SYNGR3O43761 229 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 DOK2O60496 412 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 IGHV3-9P01782 118 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 APOA1P02647 267 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 MAS1P04201 325 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 CALCBP10092 127 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF32P17041 273 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 ADRA2CP18825 462 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 CCL1P22362 96 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 CFPP27918 469 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 OR3A2P47893 321 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 TPTEP56180 551 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 SCAND1P57086 179 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 TMPRSS3P57727 454 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 TBR1Q16650 682 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 SLC36A2Q495M3 483 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 OR2A2Q6IF42 318 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 DRAM2Q6UX65 266 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 FAM57BQ71RH2 274 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 FGD2Q7Z6J4 655 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 DPPA2Q7Z7J5 298 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 SKA3Q8IX90 412 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 GDPD1Q8N9F7 314 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 OR8B12Q8NGG6 310 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF799Q96GE5 643 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 PGAM5Q96HS1 289 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 TRIB1Q96RU8 372 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 OR2H1Q9GZK4 316 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 SRRQ9GZT4 340 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 ABCB10Q9NRK6 738 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 CYSLTR2Q9NS75 346 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF275Q9NSD4 429 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-233ENST00000557529 MALT1Q9UDY8 824 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 ATPIF1Q9UII2 106 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
SHMT2-233ENST00000557529 PHF3Q92576 2039 aaKnown RBP10.94□□□□□ -0.66
SHMT2-233ENST00000557529 A0A0U1RQV5 110 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 A0A1B0GTI1 187 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 OR6C6A6NF89 314 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 F5H5K5 113 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SLC2A1P11166 492 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
SHMT2-233ENST00000557529 IGFBP3P17936 291 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-233ENST00000557529 ELK1P19419 428 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 CRYGSP22914 178 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SLC6A9P48067 706 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 IFITM3Q01628 133 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 FAPQ12884 760 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 RIN1Q13671 783 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 FBXW9Q5XUX1 488 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 GLT8D1Q68CQ7 371 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF774Q6NX45 483 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 DOK3Q7L591 496 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 PRSS45Q7RTY3 260 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 COMMD2Q86X83 199 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SERPINA12Q8IW75 414 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 NKAIN3Q8N8D7 197 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 MINDY2Q8NBR6 621 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 OR52H1Q8NGJ2 320 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 OR51E1Q8TCB6 317 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 ABHD17AQ96GS6 310 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SOSTQ9BQB4 213 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 GPR84Q9NQS5 396 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SLC17A5Q9NRA2 495 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 TAS2R4Q9NYW5 299 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 RABL2AQ9UBK7 228 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-233ENST00000557529 RABL2BQ9UNT1 228 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 ETV7Q9Y603 341 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 APC2O95996 2303 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 SPTBN2O15020 2390 aa10.93□□□□□ -0.66
SHMT2-233ENST00000557529 K7EM74 188 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 PAHP00439 452 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 MMP7P09237 267 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF20P17024 532 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 MPGP29372 298 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 HTR5AP47898 357 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 DEFA1P59665 94 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 DEFA3P59666 94 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 PSG4Q00888 419 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 ZNF79Q15937 498 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 RSPO1Q2MKA7 263 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-233ENST00000557529 KRTAP27-1Q3LI81 207 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-233ENST00000557529 ACSF3Q4G176 576 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-233ENST00000557529 KRTCAP3Q53RY4 240 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 PYDC2Q56P42 97 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 UBE2NLQ5JXB2 153 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 HES5Q5TA89 166 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 FAM180AQ6UWF9 173 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 BAIAP2L2Q6UXY1 529 aa10.92□□□□□ -0.66
SHMT2-233ENST00000557529 LYSMD2Q8IV50 215 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms