RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 ARRDC1Q8N5I2 433 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CHST4Q8NCG5 386 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 ST7LQ8TDW4 575 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 OR8D2Q9GZM6 311 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CNTD2Q9H8S5 307 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 RAB18Q9NP72 206 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 COA3Q9Y2R0 106 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CSAG2Q9Y5P2 127 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 OR2W5A6NFC9 320 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF98A6NK75 572 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 GPR31O00270 319 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 GSTP1P09211 210 aaKnown RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 PGAM2P15259 253 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 DRD1P21728 446 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 AVPR2P30518 371 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 HRH1P35367 487 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 RFC3P40938 356 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CAPZBP47756 277 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 PNLIPRP2P54317 469 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 TMEM128Q5BJH2 165 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 VAX1Q5SQQ9 334 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 EIF5AL1Q6IS14 154 aaKnown RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 SFTPA2Q8IWL1 248 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 SKA3Q8IX90 412 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF721Q8TF20 911 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 RNF133Q8WVZ7 376 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 DCUN1D4Q92564 292 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 MAP3K3Q99759 626 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 GAL3ST1Q99999 423 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 RPP25Q9BUL9 199 aaKnown RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 GPR27Q9NS67 375 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 ATPIF1Q9UII2 106 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 IGKV3D-11A0A0A0MRZ8 115 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 EEF1E1-BLOC1S5C9J1V9 151 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 F8W036 122 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 DDAH2O95865 285 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 CELA2BP08218 269 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-231ENST00000557433 H2BFMP0C1H6 154 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 PET100P0DJ07 73 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 SERPINF1P36955 418 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 RAB13P51153 203 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 BLOC1S1P78537 153 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 OR10K2Q6IF99 312 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 KCTD9Q7L273 389 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 DCXRQ7Z4W1 244 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 MARCH3Q86UD3 253 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 MISPQ8IVT2 679 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 PAQR4Q8N4S7 273 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-231ENST00000557433 OR1M1Q8NGA1 313 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 OR5D14Q8NGL3 314 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 OR10R2Q8NGX6 335 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 CASTOR1Q8WTX7 329 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-231ENST00000557433 TMEM131Q92545 1883 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 WIPF3A6NGB9 483 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 LILRA5A6NI73 299 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 CA3P07451 260 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 FASLGP48023 281 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 PJVKQ0ZLH3 352 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 FZD2Q14332 565 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 EBPQ15125 230 aaKnown RBP14.53□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF529Q6P280 563 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 POMZP3Q6PJE2 187 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 UNQ6126/PRO20091Q6UXV3 157 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 RHOUQ7L0Q8 258 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 MDGA2Q7Z553 956 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF321PQ8N8H1 164 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 TERB2Q8NHR7 220 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 TMEM234Q8WY98 164 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 MVB12AQ96EY5 273 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 FOXN4Q96NZ1 517 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 KLHDC3Q9BQ90 382 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 ZFP57Q9NU63 452 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 DNAJB11Q9UBS4 358 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 PISDQ9UG56 409 aa14.53□□□□□ -0.08
SHMT2-231ENST00000557433 OR6C76A6NM76 312 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 TMEM14DPA8MWL7 114 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 VSIG8P0DPA2 414 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 LIPCP11150 499 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 AKR1C4P17516 323 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 ADCYAP1P18509 176 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 CBX5P45973 191 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 B2MP61769 119 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 PLCXD2Q0VAA5 305 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 UNC119Q13432 240 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 PLEKHN1Q494U1 663 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-231ENST00000557433 NSUN5P2Q63ZY6 315 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 PRSS54Q6PEW0 395 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 KLHL24Q6TFL4 600 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 GPR119Q8TDV5 335 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 PAQR8Q8TEZ7 354 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 ASB10Q8WXI3 467 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 DAZLQ92904 295 aaKnown RBP14.52□□□□□ -0.09
SHMT2-231ENST00000557433 NKD1Q969G9 470 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 AQP10Q96PS8 301 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 GAL3ST4Q96RP7 486 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 RNF126Q9BV68 326 aa14.52□□□□□ -0.09
SHMT2-231ENST00000557433 RTN4RQ9BZR6 473 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms