RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PIWIL3Q7Z3Z3 882 aaKnown RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM183AQ8IXX5 376 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CSNK1G1Q9HCP0 422 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SLC23A1Q9UHI7 598 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SALL3Q9BXA9 1300 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 VNN1O95497 513 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 FBXO45P0C2W1 286 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SFTA3P0C7M3 94 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TNFRSF4P43489 277 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ZFP62Q8NB50 900 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 LKAAEAR1Q8TD35 194 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SMDT1Q9H4I9 107 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 A0A0U1RQF3 1178 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 H3BVH4 76 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 OR1C1Q15619 314 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF528Q3MIS6 628 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SYT9Q86SS6 491 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RAB37Q96AX2 223 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SIRT7Q9NRC8 400 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SPANXA1Q9NS26 97 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 LNP1A1A4G5 178 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RAG2P55895 527 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 IGFBP7Q16270 282 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM123Q8N131 208 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 OR5D18Q8NGL1 313 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SH3BGRL2Q9UJC5 107 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TCRBV7S3A2A0A539 114 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 IL1RNP18510 177 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 C21orf58P58505 322 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF816Q0VGE8 651 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 MRPL2Q5T653 305 aaKnown RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SLC17A9Q9BYT1 436 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RGPD1P0DJD0 1748 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 MYOCOSA0A1B0GUC4 107 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CCSO14618 274 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SIGLEC6O43699 453 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 OLIG1Q8TAK6 271 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 WFIKKN1Q96NZ8 548 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SYT17Q9BSW7 474 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 C11orf54Q9H0W9 315 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 UBTD1Q9HAC8 227 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ZFP30Q9Y2G7 519 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SNX11Q9Y5W9 270 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CTSLP07711 333 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 NPY5RQ15761 445 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 NAGSQ8N159 534 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 TTC9Q92623 222 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 SEC22AQ96IW7 307 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM38AQ9H6F2 299 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 OBP2AQ9NY56 170 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PRDX4Q13162 271 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 OR1L4Q8NGR5 311 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 UTP4Q969X6 686 aaKnown RBP8.1□□□□□ -1.11
SYNE3-205ENST00000557275 AP4M1O00189 453 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PMP2P02689 132 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 HIST1H1CP16403 213 aaKnown RBP8.1□□□□□ -1.11
SYNE3-205ENST00000557275 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
SYNE3-205ENST00000557275 SCAND1P57086 179 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 TEAD2Q15562 447 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 C4orf32Q8N8J7 132 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 MEOX2P50222 304 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 OR2D3Q8NGH3 330 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 P4HTMQ9NXG6 502 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 NALCNQ8IZF0 1738 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 DRD1P21728 446 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PSMB10P40306 273 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PABPC1L2AQ5JQF8 200 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 FER1L6-AS2Q96M78 137 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 TMED3Q9Y3Q3 217 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 MCM3APO60318 1980 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 FEZF1A0PJY2 475 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 CLEC18AA5D8T8 446 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 DNAL4O96015 105 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 NRASP01111 189 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 KRASP01116 189 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PIGPP57054 158 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 ADIPOQQ15848 244 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 CLEC18CQ8NCF0 446 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 RIMBP3CA6NJZ7 1639 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 RIMBP3BA6NNM3 1639 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 RIMBP3Q9UFD9 1639 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 XRCC2O43543 280 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 FGF2P09038 288 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 RHOBP62745 196 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 AQP6Q13520 282 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 YRDCQ86U90 279 aaKnown RBP8.1□□□□□ -1.11
SYNE3-205ENST00000557275 WBP2Q969T9 261 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 LCORQ96JN0 433 aaPredicted RBP8.1□□□□□ -1.11
SYNE3-205ENST00000557275 OPALINQ96PE5 141 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM147Q9BVK8 224 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 ANGPTL4Q9BY76 406 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PRSS16Q9NQE7 514 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 SLC17A5Q9NRA2 495 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 SIRT3Q9NTG7 399 aaPredicted RBP8.1□□□□□ -1.11
SYNE3-205ENST00000557275 MOB4Q9Y3A3 225 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 LEFTY2O00292 366 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 POU2F2P09086 479 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 NTSR1P30989 418 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms