RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RENP00797 406 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 PRDX6P30041 224 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 SLC6A6P31641 620 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 PAX8Q06710 450 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 COX10Q12887 443 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 KLF17Q5JT82 389 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-213ENST00000557262 LEG1Q6P5S2 330 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 CORO6Q6QEF8 472 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 COLCA1Q6ZS62 124 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 DOK3Q7L591 496 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 JAZF1Q86VZ6 243 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 FAM86B1Q8N7N1 296 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 OR10AD1Q8NGE0 317 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 ZNF420Q8TAQ5 688 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-213ENST00000557262 PYURFQ96I23 114 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 SLC30A2Q9BRI3 323 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 MIOXQ9UGB7 285 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 OR5V1Q9UGF6 321 aa13.33□□□□□ -0.28
TUBB3-213ENST00000557262 FSTL3O95633 263 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 CYB5R3P00387 301 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-213ENST00000557262 HKR1P10072 659 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 SELEP16581 610 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 PRTN3P24158 256 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 CD80P33681 288 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 FOXL1Q12952 345 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 ZNF181Q2M3W8 571 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 SLC36A3Q495N2 470 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 BCL6BQ8N143 479 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-213ENST00000557262 RNF148Q8N7C7 305 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 SLC26A10Q8NG04 563 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 OR2AJ1Q8NGZ0 328 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 OR4K13Q8NH42 304 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 ELAC2Q9BQ52 826 aaKnown RBP13.32□□□□□ -0.28
TUBB3-213ENST00000557262 CDADC1Q9BWV3 514 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 SSBP3Q9BWW4 388 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-213ENST00000557262 HCAR1Q9BXC0 346 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 OR52D1Q9H346 318 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 MED4Q9NPJ6 270 aa13.32□□□□□ -0.28
TUBB3-213ENST00000557262 A0A1B0GWJ7 208 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 LRRC30A6NM36 301 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 F5H5P2 479 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 MLNRO43193 412 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 IDH3BO43837 385 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 ZNF205O95201 554 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 PPIAL4GP0DN37 164 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 HIST1H1CP16403 213 aaKnown RBP13.31□□□□□ -0.28
TUBB3-213ENST00000557262 PAX2Q02962 417 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 ECH1Q13011 328 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 KRTAP27-1Q3LI81 207 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 BTNL3Q6UXE8 466 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 LRRN1Q6UXK5 716 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 ZBTB46Q86UZ6 589 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 MOGAT3Q86VF5 341 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 KLBQ86Z14 1044 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 C1orf87Q8N0U7 546 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 BHLHE23Q8NDY6 225 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 OR52E2Q8NGJ4 325 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 FANK1Q8TC84 345 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 RAB40AQ8WXH6 277 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 PLEKHA8Q96JA3 519 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 PITX2Q99697 317 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 TMEM246Q9BRR3 403 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 IFT27Q9BW83 186 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 MS4A7Q9GZW8 240 aaPredicted RBP13.31□□□□□ -0.28
TUBB3-213ENST00000557262 WDR76Q9H967 626 aa13.31□□□□□ -0.28
TUBB3-213ENST00000557262 ZMAT3Q9HA38 289 aaKnown RBP13.31□□□□□ -0.28
TUBB3-213ENST00000557262 RPRD1BQ9NQG5 326 aaKnown RBP13.31□□□□□ -0.28
TUBB3-213ENST00000557262 IGHV3-64DA0A0J9YX35 117 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 F5H5K5 113 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 OR10H3O60404 316 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 SEMG1P04279 462 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 ACSM4P0C7M7 580 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 RPS2P15880 293 aaKnown RBP13.3□□□□□ -0.28
TUBB3-213ENST00000557262 FPR3P25089 353 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 NOS3P29474 1203 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 IFNGR2P38484 337 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 PMELP40967 661 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 GNB2P62879 340 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 SPIBQ01892 262 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 BAMBIQ13145 260 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 SLC18B1Q6NT16 456 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 NAA40Q86UY6 237 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 MCUR1Q96AQ8 359 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 NEIL1Q96FI4 390 aaPredicted RBP13.3□□□□□ -0.28
TUBB3-213ENST00000557262 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 ZNF747Q9BV97 191 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 CYB5R1Q9UHQ9 305 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 PCDHGB1Q9Y5G3 927 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 V9GYQ6 96 aa13.3□□□□□ -0.28
TUBB3-213ENST00000557262 KIR2DS1A0A191URI9 304 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 OR6C68A6NDL8 312 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 DNAJC9-AS1A6NH13 148 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 HLA-DQA2P01906 255 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 LCATP04180 440 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 HLA-DPB1P04440 258 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 HSD17B1P14061 328 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms