RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SLC25A44Q96H78 314 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 DIRAS2Q96HU8 199 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 TMEM41AQ96HV5 264 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ARL5BQ96KC2 179 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 FER1L6-AS2Q96M78 137 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 CMTM3Q96MX0 182 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OXGR1Q96P68 337 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 TSSK2Q96PF2 358 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OR5B2Q96R09 309 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 PIGQQ9BRB3 760 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 MROQ9BYG7 248 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SLITRK2Q9H156 845 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ABCB9Q9NP78 766 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ELOVL5Q9NYP7 299 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 COMMD3Q9UBI1 195 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 RABL2AQ9UBK7 228 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 FBXL2Q9UKC9 423 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 RALYQ9UKM9 306 aaKnown RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 RABL2BQ9UNT1 228 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 IGLV1-36A0A0B4J1U3 117 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 A0A1B0GVG6 124 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ANKRD61A6NGH8 418 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 TVP23AA6NH52 213 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 AQP7P3A6NL99 342 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 TMEM212A6NML5 194 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 H3BML4 177 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 DCTN6O00399 190 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 MAGEB4O15481 346 aaPredicted RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 RAD1O60671 282 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 UPK3AO75631 287 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SC5DO75845 299 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 AQP8O94778 261 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 AKR7A3O95154 331 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PMS2P2O95744 297 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PLGP00747 810 aaPredicted RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 IGHG1P01857 330 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 UCHL1P09936 223 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 CCL3P10147 92 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ZNF43P17038 809 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SRMP19623 302 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 RAB3BP20337 219 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 IL11P20809 199 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 LAP3P28838 519 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SHC1P29353 583 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SRD5A2P31213 254 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 DCTDP32321 178 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 TALDO1P37837 337 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PSMB10P40306 273 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 RANBP1P43487 201 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 CARD18P57730 90 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 H3F3AP84243 136 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PITPNAQ00169 270 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 OC90Q02509 493 aaPredicted RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 POU3F1Q03052 451 aaPredicted RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 Q0VFX4 171 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 CDC20Q12834 499 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 AIMP2Q13155 320 aaKnown RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 ALKBH1Q13686 389 aaKnown RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 SLC17A1Q14916 467 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 CDK5R1Q15078 307 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PCK2Q16822 640 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ZNF260Q3ZCT1 412 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 HSD17B12Q53GQ0 312 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 DCAF10Q5QP82 559 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PDSS1Q5T2R2 415 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 IDNKQ5T6J7 187 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 HES3Q5TGS1 186 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 STPG1Q5TH74 334 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PRAMEF20Q5VT98 475 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 HBMQ6B0K9 141 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 DHRS13Q6UX07 377 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 FAM131AQ6UXB0 335 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 LHFPL2Q6ZUX7 228 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SSX6Q7RTT6 188 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 DPY19L4Q7Z388 723 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 MDGA2Q7Z553 956 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 KRT77Q7Z794 578 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 ZNF679Q8IYX0 411 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 OR8H2Q8N162 312 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 KDM8Q8N371 416 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ZNF676Q8N7Q3 588 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SYT14Q8NB59 555 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 CLEC1AQ8NC01 280 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 OR6N2Q8NGY6 317 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SETD6Q8TBK2 473 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ZPLD1Q8TCW7 415 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 GPR148Q8TDV2 347 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PSMF1Q92530 271 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 NSMAFQ92636 917 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 THOC3Q96J01 351 aaKnown RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 TXNDC15Q96J42 360 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PGLYRP3Q96LB9 341 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 JSRP1Q96MG2 331 aaPredicted RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 OR8B4Q96RC9 309 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ATF6BQ99941 703 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SOSTQ9BQB4 213 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 FAM173AQ9BQD7 235 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 UTP23Q9BRU9 249 aaKnown RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 SF3B5Q9BWJ5 86 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms