RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 IGHV5-51A0A0C4DH38 117 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 A0A1B0GVX0 72 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 COLCA2A8K830 154 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 B4GALT5O43286 388 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 HBE1P02100 147 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 TPM1P09493 284 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 RFC3P40938 356 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 SERPINB8P50452 374 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 HADHBP55084 474 aaKnown RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 CLINT1Q14677 625 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 PON3Q15166 354 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 OR7A5Q15622 319 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF829Q3KNS6 432 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 GPR107Q5VW38 600 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 SLC25A25Q6KCM7 469 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 LINC00336Q6ZUF6 198 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 TMEM150AQ86TG1 271 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 RNF182Q8N6D2 247 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 CSGALNACT2Q8N6G5 542 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 INO80EQ8NBZ0 244 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 OR51L1Q8NGJ5 315 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 OR10G4Q8NGN3 311 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 OR2A1Q8NGT9 310 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 OR10J6PQ8NGY7 276 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 OR51F2Q8NH61 342 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 PIH1D2Q8WWB5 315 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 GEMIN6Q8WXD5 167 aaKnown RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 TMIGD2Q96BF3 282 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 APH1AQ96BI3 265 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 C9orf72Q96LT7 481 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 SIKE1Q9BRV8 207 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 NDFIP1Q9BT67 221 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 NAA50Q9GZZ1 169 aaKnown RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 XKR8Q9H6D3 395 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 DYRK4Q9NR20 520 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 SIRT7Q9NRC8 400 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 CLN6Q9NWW5 311 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 ZMAT5Q9UDW3 170 aaKnown RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 SHPKQ9UHJ6 478 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 MAPK8IP3Q9UPT6 1336 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 IGLV1-36A0A0B4J1U3 117 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 TSPAN11A1L157 253 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 NCBP2LA6PVI3 153 aaKnown RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 LYRM9A8MSI8 78 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF705GA8MUZ8 300 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 LSM8O95777 96 aaKnown RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ARG1P05089 322 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CD5P06127 495 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 IVLP07476 585 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 DCNP07585 359 aaKnown RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 KRT16P08779 473 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 GNAO1P09471 354 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 TACSTD2P09758 323 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 PGAM1P18669 254 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 PTNP21246 168 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 AK4P27144 223 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CASQ1P31415 396 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 NUP62P37198 522 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 GPR1P46091 355 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ATP6V0D1P61421 351 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 SEMG2Q02383 582 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CDH17Q12864 832 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 TSC22D1Q15714 1073 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 PSMD5Q16401 504 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ZSCAN26Q16670 478 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 MLIPQ5VWP3 458 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ANKRD22Q5VYY1 191 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 NANOGP8Q6NSW7 305 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 PEX26Q7Z412 305 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 PGAM4Q8N0Y7 254 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ARRDC1Q8N5I2 433 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 FBXO36Q8NEA4 188 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 DNAJC1Q96KC8 554 aaKnown RBP2.45□□□□□ -2.02
SCFD1-221ENST00000556534 FOXC2Q99958 501 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CHID1Q9BWS9 393 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 DEFB129Q9H1M3 183 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 LINC00597Q9H2U6 94 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CD209Q9NNX6 404 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF222Q9UK12 451 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 KPTNQ9Y664 436 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 SAR1BQ9Y6B6 198 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 COL1A2P08123 1366 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
SCFD1-221ENST00000556534 CENPJQ9HC77 1338 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 NDUFS8O00217 210 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 BET1O15155 118 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 ERI3O43414 337 aaKnown RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 RAD51CO43502 376 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 FARS2O95363 451 aaKnown RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 PAHP00439 452 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 OR5H8P0DN80 308 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 MUC1P15941 1255 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 CSNK2A2P19784 350 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 MAS1LP35410 378 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 CCNG1P51959 295 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 PSMD4P55036 377 aaKnown RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF33AQ06730 810 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 STK11Q15831 433 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 FBXO48Q5FWF7 155 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 CCNJQ5T5M9 372 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms