RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 GABRG3Q99928 467 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 PDCD1LG2Q9BQ51 273 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 SEC22CQ9BRL7 303 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 PDCD10Q9BUL8 212 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF426Q9BUY5 554 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 NARFLQ9H6Q4 476 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 WDR76Q9H967 626 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 FKRPQ9H9S5 495 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 C12orf10Q9HB07 376 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM9BQ9NQ34 198 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 EXOSC3Q9NQT5 275 aaKnown RBP3.94□□□□□ -1.78
ATXN3-241ENST00000556374 UBQLN4Q9NRR5 601 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 SOHLH2Q9NX45 425 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 SLCO1C1Q9NYB5 712 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 FLRT3Q9NZU0 649 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 MRPL15Q9P015 296 aaKnown RBP3.94□□□□□ -1.78
ATXN3-241ENST00000556374 CPNE7Q9UBL6 633 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 GLS2Q9UI32 602 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 FBXL4Q9UKA2 621 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 FOXJ3Q9UPW0 622 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 DHDHQ9UQ10 334 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 ERVK-19Q9WJR5 959 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 ADAM18Q9Y3Q7 739 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 PCDHGA9Q9Y5G4 932 aaKnown RBP3.94□□□□□ -1.78
ATXN3-241ENST00000556374 NPTNQ9Y639 398 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 AUP1Q9Y679 476 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 CKAP5Q14008 2032 aa3.94□□□□□ -1.78
ATXN3-241ENST00000556374 A0A0A6YYC8 382 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 A0A0A6YYH2 397 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TRBV5-5A0A0J9YX44 114 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SPAARA0A1B0GVQ0 90 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM72A0PK05 275 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 POM121BA6NF01 834 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 A6NJ64 397 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 B4DGG1 531 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DISC1C4P0D8 188 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PRAMEF26H0Y7S4 382 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PYCARD-AS1I3L0S3 204 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 I3L1I5 382 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PSMD9O00233 223 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SULT1C2O00338 296 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ARPC5O15511 151 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF264O43296 627 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 XRCC3O43542 346 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 GMDSO60547 372 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CTNSO60931 367 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 B3GALNT1O75752 331 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CDC123O75794 336 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TSPAN9O75954 239 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SCGNO76038 276 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 AQP8O94778 261 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 GLSO94925 669 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NXPH3O95157 252 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 EML2O95834 649 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NUDT14O95848 222 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 HRGP04196 525 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 MAS1P04201 325 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NGFRP08138 427 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SPARCP09486 303 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CT62P0C5K7 136 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TFPIP10646 304 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 GP1BBP13224 206 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF35P13682 527 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PVRP15151 417 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CXCL3P19876 107 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PGCP20142 388 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 S1PR1P21453 382 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DRD1P21728 446 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NFYAP23511 347 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CXCR1P25024 350 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DPP4P27487 766 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CCKBRP32239 447 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PRSS3P35030 304 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 RORAP35398 523 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DNASE1L1P49184 302 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 STARP49675 285 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 P2RX1P51575 399 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CLDN12P56749 244 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 HSD17B7P56937 341 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SEC61A1P61619 476 aaKnown RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 RPS4XP62701 263 aaKnown RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DHODHQ02127 395 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TLE1Q04724 770 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PUDPQ08623 228 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 EIF2B5Q13144 721 aaKnown RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CAMK2DQ13557 499 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CBFBQ13951 182 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 MEF2DQ14814 521 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ZMYND11Q15326 602 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 MPPED2Q15777 294 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF74Q16587 644 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DEFB110Q30KQ9 67 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 LINC00303Q3SY05 128 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 LGALSLQ3ZCW2 172 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 GXYLT1Q4G148 440 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM196Q5HYL7 178 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PRAMEF17Q5VTA0 474 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SLC18B1Q6NT16 456 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms