RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 FABP3P05413 133 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 HIST1H1CP16403 213 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 ERFP50548 548 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 HMGA2P52926 109 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 SPIBQ01892 262 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 TSPAN31Q12999 210 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 ZNF154Q13106 437 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 HLXQ14774 488 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 RSPO1Q2MKA7 263 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 ESCO2Q56NI9 601 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 OR2T2Q6IF00 324 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 SLC18B1Q6NT16 456 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 LEG1Q6P5S2 330 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 ZNF620Q6ZNG0 422 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 LINC00471Q8N535 108 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 RNF148Q8N7C7 305 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 GCDHQ92947 438 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 ERGIC1Q969X5 290 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 NSMCE2Q96MF7 247 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 SLC6A7Q99884 636 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 ATF6BQ99941 703 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 HCAR1Q9BXC0 346 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 PTTG3PQ9NZH4 202 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 NUP50Q9UKX7 468 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 AUP1Q9Y679 476 aa10.67□□□□□ -0.7
HNRNPC-221ENST00000555883 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 CEACAM18A8MTB9 384 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 TRAPPC2LH3BP13 241 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 ARPC2O15144 300 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 MLNRO43193 412 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 WNT2P09544 360 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 NOS3P29474 1203 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 GGT2P36268 569 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 PAX2Q02962 417 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 MEP1BQ16820 701 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 ARMCX4Q5H9R4 360 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 CFAP77Q6ZQR2 320 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 DOK3Q7L591 496 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 C1orf87Q8N0U7 546 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 ZDHHC22Q8N966 263 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 ATG16L2Q8NAA4 619 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 Q8TCH9 128 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 GNPDA2Q8TDQ7 276 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 MRI1Q9BV20 369 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 IFT27Q9BW83 186 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 SRA1Q9HD15 236 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 PNRC2Q9NPJ4 139 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 ESM1Q9NQ30 184 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 RPRD1BQ9NQG5 326 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 MMP26Q9NRE1 261 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 MIOXQ9UGB7 285 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 OR5V1Q9UGF6 321 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 TMCC3Q9ULS5 477 aa10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 NOP16Q9Y3C1 178 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-221ENST00000555883 OR6C68A6NDL8 312 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 GPANK1O95872 356 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 RRM2P31350 389 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OTX1P32242 354 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 CENPAP49450 140 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 SEC61A1P61619 476 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 UBA52P62987 128 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 PAX8Q06710 450 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 TRAP1Q12931 704 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 MALLQ13021 153 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 GK2Q14410 553 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 ZNF404Q494X3 552 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OTPQ5XKR4 325 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 PGBD2Q6P3X8 592 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 CORO6Q6QEF8 472 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 C16orf89Q6UX73 402 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 RBMS3Q6XE24 437 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 CPLX4Q7Z7G2 160 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OR5AS1Q8N127 324 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OR10AD1Q8NGE0 317 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OR52L1Q8NGH7 329 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OR2AJ1Q8NGZ0 328 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 OR4K13Q8NH42 304 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 DACT3Q96B18 629 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 PLEKHA8Q96JA3 519 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 PITX2Q99697 317 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 CDADC1Q9BWV3 514 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 SSBP3Q9BWW4 388 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 TRIM15Q9C019 465 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 TMEM165Q9HC07 324 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 DDX28Q9NUL7 540 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 TMEM100Q9NV29 134 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 IL20Q9NYY1 176 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 TAGLN3Q9UI15 199 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 CDH10Q9Y6N8 788 aa10.65□□□□□ -0.7
HNRNPC-221ENST00000555883 DYSFO75923 2080 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 CLDN34H7C241 214 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 BHLHE40O14503 412 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 RGS9O75916 674 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 PTBP3O95758 552 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 CD200P41217 278 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 MAGEA2P43356 314 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms