RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CFL1P23528 166 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 MAPK3P27361 379 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 APEX1P27695 318 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 RPL5P46777 297 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 OR12D2P58182 307 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 RPS23P62266 143 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ACSM1Q08AH1 577 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 RAB39AQ14964 217 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 CCDC92Q53HC0 331 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 LIPNQ5VXI9 398 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 RPL22L1Q6P5R6 122 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF704Q6ZNC4 412 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF676Q8N7Q3 588 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ITLN2Q8WWU7 325 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 SGCDQ92629 289 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 SMIM19Q96E16 107 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 WNT5BQ9H1J7 359 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ESRP2Q9H6T0 727 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 PLEKHA1Q9HB21 404 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 BRD7Q9NPI1 651 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 CLEC2DQ9UHP7 191 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 MRM2Q9UI43 246 aaKnown RBP9.76□□□□□ -0.85
SHMT2-220ENST00000555634 NBASA2RRP1 2371 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 A0A1B0GVI7 797 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 J3QKU1 62 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 XRCC2O43543 280 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 IGKV3-15P01624 115 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 LCATP04180 440 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 LCKP06239 509 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 CELP19835 753 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 CCKARP32238 428 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 MMP16P51512 607 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF83P51522 516 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 CCR9P51686 369 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 PRKXP51817 358 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF121P58317 390 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 CDK5R1Q15078 307 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 TAB1Q15750 504 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 TSTQ16762 297 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 ARMCX4Q5H9R4 360 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 FTMTQ8N4E7 242 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 CCDC54Q8NEL0 328 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 OR5AK2Q8NH90 309 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 TSEN15Q8WW01 171 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 AKAP1Q92667 903 aaKnown RBP eCLIP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 MUL1Q969V5 352 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 APOBEC3DQ96AK3 386 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 PELI1Q96FA3 418 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 ZC3HAV1LQ96H79 300 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 AMELYQ99218 206 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 RGCCQ9H4X1 137 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 HEATR1Q9H583 2144 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 ISG20L2Q9H9L3 353 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 PNRC2Q9NPJ4 139 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF224Q9NZL3 707 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 LSM2Q9Y333 95 aaKnown RBP9.75□□□□□ -0.85
SHMT2-220ENST00000555634 GRIP1Q9Y3R0 1128 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 N6AMT1Q9Y5N5 214 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 SLC25A15Q9Y619 301 aa9.75□□□□□ -0.85
SHMT2-220ENST00000555634 BSNQ9UPA5 3926 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 PNMA8CA0A1B0GUJ8 204 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 CCDC160A6NGH7 325 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 TRIM64CA6NLI5 447 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 CD2P06729 351 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 PSKH1P11801 424 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 CPEP16870 476 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF14P17017 642 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 JUNBP17275 347 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 CD53P19397 219 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 PCMT1P22061 227 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 CRYGSP22914 178 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 TUBG1P23258 451 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 PTAFRP25105 342 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 GABRA5P31644 462 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 RAD52P43351 418 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 SLC3A1Q07837 685 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 GPR50Q13585 617 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 ALKBH1Q13686 389 aaKnown RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 GFOD2Q3B7J2 385 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 SYT6Q5T7P8 510 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 TMEM244Q5VVB8 128 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 FAM57BQ71RH2 274 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 MRPL21Q7Z2W9 205 aaKnown RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 MS4A15Q8N5U1 240 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 WDR31Q8NA23 367 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 OR2G2Q8NGZ5 317 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 SSC4DQ8WTU2 575 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 OR5M11Q96RB7 305 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 BCL2L14Q9BZR8 327 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 TUBG2Q9NRH3 451 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 NDUFB11Q9NX14 153 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 B3GNT2Q9NY97 397 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 CRNNQ9UBG3 495 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 NUFIP1Q9UHK0 495 aaKnown RBP9.74□□□□□ -0.85
SHMT2-220ENST00000555634 POU2F3Q9UKI9 436 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 OR52A1Q9UKL2 312 aa9.74□□□□□ -0.85
SHMT2-220ENST00000555634 SPENQ96T58 3664 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms