RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 LUZP2Q86TE4 346 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 LRRTM1Q86UE6 522 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 ZNF433Q8N7K0 673 aaPredicted RBP15.39■□□□□ 0.05
SHOX-204ENST00000554971 ZNF454Q8N9F8 522 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 DTX3Q8N9I9 347 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 OR6N2Q8NGY6 317 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 SLC25A38Q96DW6 304 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 SFXN2Q96NB2 322 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 PLSCR3Q9NRY6 295 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 IKZF2Q9UKS7 526 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 CLEC4AQ9UMR7 237 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 B9D1Q9UPM9 204 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 KLHDC2Q9Y2U9 406 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 BOLA1Q9Y3E2 137 aa15.39■□□□□ 0.05
SHOX-204ENST00000554971 TMED7-TICAM2A0A0A6YYA0 188 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 NPIPA2E9PIF3 369 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 NPIPA3F8WFD2 350 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 H0YC42 278 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 DCTN6O00399 190 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 ZNF780AO75290 641 aaPredicted RBP15.38■□□□□ 0.05
SHOX-204ENST00000554971 RPP14O95059 124 aaKnown RBP15.38■□□□□ 0.05
SHOX-204ENST00000554971 AKR7A3O95154 331 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 ZNF17P17021 662 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 LHX2P50458 406 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 CLDN15P56746 228 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 ROM1Q03395 351 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 FCN2Q15485 313 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 C3AR1Q16581 482 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 GSG1Q2KHT4 349 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 HES5Q5TA89 166 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 DNM1P46Q6ZS02 220 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 LINGO2Q7L985 606 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 ZNF519Q8TB69 540 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 ST8SIA1Q92185 356 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 MED30Q96HR3 178 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 OR8B4Q96RC9 309 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 PTDSS2Q9BVG9 487 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 SYT4Q9H2B2 425 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 OR5V1Q9UGF6 321 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 FOXJ3Q9UPW0 622 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 TMED7Q9Y3B3 224 aa15.38■□□□□ 0.05
SHOX-204ENST00000554971 TRAV6A0A075B6T7 132 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 PYCARD-AS1I3L0S3 204 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 OR6A2O95222 327 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 TGM6O95932 706 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 GRPRP30550 384 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 MAP2K6P52564 334 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 Q5BKY6 102 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 C1orf140Q5VVS0 124 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 FAM205BPQ63HN1 556 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 SLC18B1Q6NT16 456 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 KCTD18Q6PI47 426 aaPredicted RBP15.37■□□□□ 0.05
SHOX-204ENST00000554971 ZNF676Q8N7Q3 588 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 MCHR2Q969V1 340 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 MRGPRX4Q96LA9 322 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 PIGQQ9BRB3 760 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 ZNF835Q9Y2P0 537 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 NPIPB13A6NJU9 1138 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 NPIPB4C9JG80 1138 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 ALX3O95076 343 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 PSMB1P20618 241 aaKnown RBP15.37■□□□□ 0.05
SHOX-204ENST00000554971 ADH6P28332 368 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 CRABP1P29762 137 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 PTGS2P35354 604 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 PTH2RP49190 550 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 CLDN18P56856 261 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 ZP4Q12836 540 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 TEX30Q5JUR7 227 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 TMEM69Q5SWH9 247 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 OLFML2AQ68BL7 652 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 DPY19L4Q7Z388 723 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 ADGRG3Q86Y34 549 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 ZNF679Q8IYX0 411 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 SYNPRQ8TBG9 265 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 THEM6Q8WUY1 208 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 C4orf45Q96LM5 186 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 EXO5Q9H790 373 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 TMEM185BQ9H7F4 350 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 SLC17A5Q9NRA2 495 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 FBXL3Q9UKT7 428 aa15.37■□□□□ 0.05
SHOX-204ENST00000554971 OR14I1A6ND48 311 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 TVP23AA6NH52 213 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 A6NIZ1 184 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 ANXA2P2A6NMY6 339 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 H3BML4 177 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 PEX14O75381 377 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 AHSA1O95433 338 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 OPN1LWP04000 364 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 ANXA2P07355 339 aaKnown RBP15.36■□□□□ 0.05
SHOX-204ENST00000554971 EIF1P41567 113 aaKnown RBP15.36■□□□□ 0.05
SHOX-204ENST00000554971 SUCLG1P53597 346 aaKnown RBP15.36■□□□□ 0.05
SHOX-204ENST00000554971 RAP1BP61224 184 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 RAP1AP62834 184 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 SLC17A1Q14916 467 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 PM20D2Q8IYS1 436 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 GALNT11Q8NCW6 608 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 OR5M9Q8NGP3 310 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 RNF128Q8TEB7 428 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 RELTQ969Z4 430 aa15.36■□□□□ 0.05
SHOX-204ENST00000554971 RADILQ96JH8 1075 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms