RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 PNRC2Q9NPJ4 139 aaKnown RBP6.98□□□□□ -1.29
LINC01397-201ENST00000554808 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
LINC01397-201ENST00000554808 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
LINC01397-201ENST00000554808 GPR160Q9UJ42 338 aa6.98□□□□□ -1.29
LINC01397-201ENST00000554808 DIMT1Q9UNQ2 313 aaKnown RBP6.98□□□□□ -1.29
LINC01397-201ENST00000554808 EXOSC1Q9Y3B2 195 aaKnown RBP6.98□□□□□ -1.29
LINC01397-201ENST00000554808 F8P00451 2351 aa6.98□□□□□ -1.29
LINC01397-201ENST00000554808 APCP25054 2843 aa6.98□□□□□ -1.29
LINC01397-201ENST00000554808 DYSFO75923 2080 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 SHISA9B4DS77 424 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 HS3ST1O14792 307 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 XRCC2O43543 280 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 MRPS14O60783 128 aaKnown RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 FAM20BO75063 409 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 CELA3BP08861 270 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 ROS1P08922 2347 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 BMP4P12644 408 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 CCNOP22674 350 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 NR4A1P22736 598 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 CFL1P23528 166 aaKnown RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 LOXP28300 417 aaPredicted RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 OPRL1P41146 370 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 RPS27P42677 84 aaKnown RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 SLC6A9P48067 706 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 EVX1P49640 407 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 UCP2P55851 309 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 GABARAPL2P60520 117 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 PSMA6P60900 246 aaKnown RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 MALLQ13021 153 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 SNTB2Q13425 540 aaKnown RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 GALEQ14376 348 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 KRTAP27-1Q3LI81 207 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 ZNF672Q499Z4 452 aaPredicted RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 TMEM154Q6P9G4 183 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 ZNF322Q6U7Q0 402 aaPredicted RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 TMPRSS11AQ6ZMR5 421 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 STX19Q8N4C7 294 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 ZNF283Q8N7M2 679 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 ZNF540Q8NDQ6 660 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 OR10H4Q8NGA5 316 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 OR52H1Q8NGJ2 320 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 OR10S1Q8NGN2 331 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 SNX33Q8WV41 574 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 LGALS12Q96DT0 336 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 TMEM80Q96HE8 168 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 MS4A3Q96HJ5 214 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 C4orf45Q96LM5 186 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 CNBD2Q96M20 576 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 DOK1Q99704 481 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 DHRS9Q9BPW9 319 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 C1QTNF6Q9BXI9 259 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 C1QTNF5Q9BXJ0 243 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
LINC01397-201ENST00000554808 RGCCQ9H4X1 137 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 CENPMQ9NSP4 180 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 IKZF2Q9UKS7 526 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 LRP12Q9Y561 859 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 DOCK11Q5JSL3 2073 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
LINC01397-201ENST00000554808 LOC100509620A0A075B734 347 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ATP6V1G2-DDX39BF2Z307 99 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 F5H5K5 113 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 J3QRE1 110 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 SIAH2O43255 324 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 SMPD2O60906 423 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 MT-ND5P03915 603 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ACSM4P0C7M7 580 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 SELEP16581 610 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 GCH1P30793 250 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CALCRP30988 508 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 APOBEC3AP31941 199 aaPredicted RBP6.96□□□□□ -1.3
LINC01397-201ENST00000554808 LIPAP38571 399 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CX3CR1P49238 355 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 MMP16P51512 607 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 NKX6-1P78426 367 aaPredicted RBP6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ST3GAL4Q11206 333 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF718Q3SXZ3 478 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CDONQ4KMG0 1287 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ZMAT1Q5H9K5 638 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 RNLSQ5VYX0 342 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 RGS7BPQ6MZT1 257 aaPredicted RBP6.96□□□□□ -1.3
LINC01397-201ENST00000554808 B3GLCTQ6Y288 498 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 COLCA1Q6ZS62 124 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 AHSA2Q719I0 299 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 FBXL14Q8N1E6 418 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF611Q8N823 705 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CCDC54Q8NEL0 328 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 BPIFB6Q8NFQ5 453 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 KBTBD8Q8NFY9 601 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 OR52I1Q8NGK6 324 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 OR1J1Q8NGS3 322 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 OR52N1Q8NH53 320 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CA10Q9NS85 328 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ERVK13-1Q9NX77 482 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CISD1Q9NZ45 108 aaKnown RBP6.96□□□□□ -1.3
LINC01397-201ENST00000554808 PSORS1C1Q9UIG5 152 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 LRCH1Q9Y2L9 728 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 CAB39Q9Y376 341 aaPredicted RBP6.96□□□□□ -1.3
LINC01397-201ENST00000554808 NOP16Q9Y3C1 178 aaKnown RBP6.96□□□□□ -1.3
LINC01397-201ENST00000554808 GRIP1Q9Y3R0 1128 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms