RNA–Protein interactions for RNA: ENST00000554652.5

RALGAPA1-209, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 2

Gene RALGAPA1, Length 4,487 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-209	ENST00000554652	DDX28	Q9NUL7	540 aa	Known RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OR52A1	Q9UKL2	312 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZDHHC8	Q9ULC8	765 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	LOC100506127	A0A0U1RQW1	187 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	NKX6-3	A6NJ46	265 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652		H7C1Q1	480 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZNF701	M0R085	212 aa	Predicted RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	IGHA1	P01876	353 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZNF32	P17041	273 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	RAB3A	P20336	220 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CRYGS	P22914	178 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	KIR2DL2	P43627	348 aa	Predicted RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	MMP16	P51512	607 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	SCAND1	P57086	179 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	HIST3H3	Q16695	136 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CDON	Q4KMG0	1287 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	RNFT1	Q5M7Z0	435 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	FDX2	Q6P4F2	183 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	LRFN4	Q6PJG9	635 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	LHFPL2	Q6ZUX7	228 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	USP43	Q70EL4	1123 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	DPY19L4	Q7Z388	723 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	MKX	Q8IYA7	352 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZNF610	Q8N9Z0	462 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	SEMA6D	Q8NFY4	1073 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OR13C3	Q8NGS6	347 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	NEU4	Q8WWR8	484 aa	Predicted RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	STARD4	Q96DR4	205 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	LGALS12	Q96DT0	336 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ELMOD3	Q96FG2	381 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	URM1	Q9BTM9	101 aa	Known RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CST11	Q9H112	138 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZC4H2	Q9NQZ6	224 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ERVK13-1	Q9NX77	482 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	TINAG	Q9UJW2	476 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	PCDHB10	Q9UN67	800 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	GRIP1	Q9Y3R0	1128 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	DNAJC13	O75165	2243 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ICE1	Q9Y2F5	2266 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	hCG_1807616	A0A1W2PRN6	198 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	METTL21EP	A6NDL7	271 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	KDM4B	O94953	1096 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CRHBP	P24387	322 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	GADD45A	P24522	165 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	GLRX	P35754	106 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CDKN2A	P42771	156 aa	Known RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	LTB	Q06643	244 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	TESK1	Q15569	626 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	MEP1B	Q16820	701 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	HSD17B12	Q53GQ0	312 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	PABPC1L2A	Q5JQF8	200 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	C16orf54	Q6UWD8	224 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	THSD4	Q6ZMP0	1018 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	TMEM179B	Q7Z7N9	219 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZNF573	Q86YE8	665 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	NUP37	Q8NFH4	326 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	SGCD	Q92629	289 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	BORCS8	Q96FH0	119 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ABHD6	Q9BV23	337 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	RTN4R	Q9BZR6	473 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	DUSP21	Q9H596	190 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	SPACA1	Q9HBV2	294 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	MGAT4A	Q9UM21	535 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	STUB1	Q9UNE7	303 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	COL6A6	A6NMZ7	2263 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652		A0A0G2JNJ9	132 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OR6C68	A6NDL8	312 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652		F5H5K5	113 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	TGM6	O95932	706 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	THY1	P04216	161 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CD1E	P15812	388 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CTLA4	P16410	223 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ALOX5AP	P20292	161 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	SHC1	P29353	583 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	GABRA5	P31644	462 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	UGT2B10	P36537	528 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	FABP6	P51161	128 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	LRRC18	Q8N456	261 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	C19orf18	Q8NEA5	215 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OR51A2	Q8NGJ7	313 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OR52I1	Q8NGK6	324 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OR8D4	Q8NGM9	314 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	FBXW5	Q969U6	566 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CCDC120	Q96HB5	630 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	C4orf45	Q96LM5	186 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	ZNF416	Q9BWM5	594 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	PLA2G12A	Q9BZM1	189 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	DECR2	Q9NUI1	292 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652		Q9UFV3	132 aa		4.54	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	INTS1	Q8N201	2190 aa	Known RBP	4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	TVP23A	A6NH52	213 aa		4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	UPK3A	O75631	287 aa		4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	RPP14	O95059	124 aa	Known RBP	4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	MRPL3	P09001	348 aa	Known RBP	4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	JUNB	P17275	347 aa	Predicted RBP	4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652	CD83	Q01151	205 aa		4.53	□□□□□ -1.68
RALGAPA1-209	ENST00000554652		Q499Y3	187 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms