RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.41□□□□□ -1.22
ACTN1-213ENST00000554508 COX10Q12887 443 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 ECH1Q13011 328 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 TMEM255AQ5JRV8 349 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 RASSF6Q6ZTQ3 369 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 GLCCI1Q86VQ1 547 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 ZDHHC13Q8IUH4 622 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 SLC26A10Q8NG04 563 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 OR52E2Q8NGJ4 325 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 OR2AJ1Q8NGZ0 328 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 OR51F2Q8NH61 342 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 GTF3AQ92664 365 aaKnown RBP7.41□□□□□ -1.22
ACTN1-213ENST00000554508 APOBEC3DQ96AK3 386 aaPredicted RBP7.41□□□□□ -1.22
ACTN1-213ENST00000554508 RAB39BQ96DA2 213 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 CMBLQ96DG6 245 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 NRBF2Q96F24 287 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 NIPSNAP1Q9BPW8 284 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 CDADC1Q9BWV3 514 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 DGCR6LQ9BY27 220 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 EGLN3Q9H6Z9 239 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 RPRD1BQ9NQG5 326 aaKnown RBP7.41□□□□□ -1.22
ACTN1-213ENST00000554508 TBC1D23Q9NUY8 699 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 IL20Q9NYY1 176 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 TREM2Q9NZC2 230 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 KCNG2Q9UJ96 466 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 PURGQ9UJV8 347 aaKnown RBP7.41□□□□□ -1.22
ACTN1-213ENST00000554508 OAZ3Q9UMX2 235 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 LHFPL6Q9Y693 200 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 CDH10Q9Y6N8 788 aa7.41□□□□□ -1.22
ACTN1-213ENST00000554508 MXRA5Q9NR99 2828 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 TRAV20A0A0B4J274 112 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 OR6C68A6NDL8 312 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 ZSCAN5BA6NJL1 495 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 RNF212BA8MTL3 300 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 FAM157AC9JC47 383 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 H3BN98 237 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 BHLHE40O14503 412 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 WNT9BO14905 357 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SURF4O15260 269 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SOX14O95416 240 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 GPANK1O95872 356 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 HLA-DQA2P01906 255 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 MSMBP08118 114 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 TNFRSF1AP19438 455 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 ELF3P78545 371 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-213ENST00000554508 TNFAIP6P98066 277 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-213ENST00000554508 MVKQ03426 396 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 RCN1Q15293 331 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 MEP1BQ16820 701 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 CLEC12AQ5QGZ9 265 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SLC35F1Q5T1Q4 408 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 OTPQ5XKR4 325 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SLC18B1Q6NT16 456 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 ACSM5Q6NUN0 579 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SLC27A4Q6P1M0 643 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 FBXW12Q6X9E4 464 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 IL17RELQ6ZVW7 336 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.4□□□□□ -1.22
ACTN1-213ENST00000554508 PEG10Q86TG7 708 aaKnown RBP7.4□□□□□ -1.22
ACTN1-213ENST00000554508 PQLC1Q8N2U9 271 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 SLC7A6Q92536 515 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 CCL17Q92583 94 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 TMEM186Q96B77 213 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 DDOQ99489 341 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 POFUT1Q9H488 388 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 NARFLQ9H6Q4 476 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 ZNF665Q9H7R5 613 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 MSL2Q9HCI7 577 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 HIF1ANQ9NWT6 349 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 IL19Q9UHD0 177 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 CYB5R1Q9UHQ9 305 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 BAIAP2Q9UQB8 552 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 WIPI2Q9Y4P8 454 aa7.4□□□□□ -1.22
ACTN1-213ENST00000554508 IFNL4K9M1U5 179 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
ACTN1-213ENST00000554508 DBHP09172 617 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 ZNF823P16415 610 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 SELEP16581 610 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 POU1F1P28069 291 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 SRP14P37108 136 aaKnown RBP7.39□□□□□ -1.23
ACTN1-213ENST00000554508 DAPP51397 102 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 RSPO1Q2MKA7 263 aaPredicted RBP7.39□□□□□ -1.23
ACTN1-213ENST00000554508 KRTAP27-1Q3LI81 207 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 AVPI1Q5T686 147 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 FAHD1Q6P587 224 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 CORO6Q6QEF8 472 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 CD300LDQ6UXZ3 194 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 COLCA1Q6ZS62 124 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 LINC00346Q8IVM7 164 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 LNX2Q8N448 690 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 TEX29Q8N6K0 151 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 OR13G1Q8NGZ3 307 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 OR2T4Q8NH00 348 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 TEX47Q8TBZ9 253 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 DNAJC9Q8WXX5 260 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 PITX2Q99697 317 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 CIB1Q99828 191 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 TSSK6Q9BXA6 273 aa7.39□□□□□ -1.23
ACTN1-213ENST00000554508 C1QTNF5Q9BXJ0 243 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms