RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 F5H0A9 414 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 IDH3BO43837 385 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SLC16A7O60669 478 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 PPIAL4GP0DN37 164 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ATP6V1B2P21281 511 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 FPR2P25090 351 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 CFPP27918 469 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 MSX2P35548 267 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SLC6A9P48067 706 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ACTR3P61158 418 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 BTG1P62324 171 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 COX10Q12887 443 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SEC23BQ15437 767 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF181Q2M3W8 571 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 KRTAP27-1Q3LI81 207 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 CCDC92Q53HC0 331 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SPRNQ5BIV9 151 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 FGD3Q5JSP0 725 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 OR2T5Q6IEZ7 315 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SMARCD3Q6STE5 483 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 THSD4Q6ZMP0 1018 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 COLCA1Q6ZS62 124 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 PTCHD4Q6ZW05 846 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SPATA24Q86W54 205 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ADGRG5Q8IZF4 528 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 MUC20Q8N307 709 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 KLHL36Q8N4N3 616 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 OR2Z1Q8NG97 314 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 OR2T29Q8NH02 315 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 APOBEC3DQ96AK3 386 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 NRBF2Q96F24 287 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 SIGLEC11Q96RL6 698 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 CHID1Q9BWS9 393 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 NUAK2Q9H093 628 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 POFUT1Q9H488 388 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 C7orf69Q9H7B7 122 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 NTN4Q9HB63 628 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 PATZ1Q9HBE1 687 aaKnown RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ASH2LQ9UBL3 628 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 OPN4Q9UHM6 478 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 TMCC3Q9ULS5 477 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 PPP1R3CQ9UQK1 317 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 LRCH1Q9Y2L9 728 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 COA3Q9Y2R0 106 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-203ENST00000554074 IER3IP1Q9Y5U9 82 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 LHFPL6Q9Y693 200 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 IGLV1-36A0A0B4J1U3 117 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 TRBV4-1A0A0J9YWV2 114 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 IQCF6A8MYZ5 107 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 TMEM178BH3BS89 294 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SOCS2O14508 198 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 RER1O15258 196 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 GADD45GO95257 159 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 RENP00797 406 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SBK2P0C263 348 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF12P17014 697 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 FPR3P25089 353 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZFP36P26651 326 aaKnown RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 RRM2P31350 389 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SLC6A6P31641 620 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 MDH2P40926 338 aaKnown RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 CDKN2AP42771 156 aaKnown RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 GATA4P43694 442 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SRP9P49458 86 aaKnown RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 MMP16P51512 607 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ACTG1P63261 375 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 LCN2P80188 198 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ECH1Q13011 328 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF154Q13106 437 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZMYND11Q15326 602 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 RFX4Q33E94 735 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SLC36A3Q495N2 470 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 RPL13AP3Q6NVV1 102 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZBTB46Q86UZ6 589 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 OR6V1Q8N148 313 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 BPIFB2Q8N4F0 458 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 FAM86B1Q8N7N1 296 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 CELF2-AS1Q8N7Q2 184 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 DEFB108BQ8NET1 73 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SLC26A10Q8NG04 563 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 OR8G5Q8NG78 346 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 OR13G1Q8NGZ3 307 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 FANK1Q8TC84 345 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 CANT1Q8WVQ1 401 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ITLN1Q8WWA0 313 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 DNAJC9Q8WXX5 260 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SLC7A6Q92536 515 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 GCDHQ92947 438 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 DVL3Q92997 716 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF582Q96NG8 517 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ERMAPQ96PL5 475 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 OR2V2Q96R30 315 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 SLC30A2Q9BRI3 323 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 C1QTNF5Q9BXJ0 243 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 OR52D1Q9H346 318 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 REEP1Q9H902 201 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
SLIRP-203ENST00000554074 GCM1Q9NP62 436 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 DCAF16Q9NXF7 216 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 UBAP1Q9NZ09 502 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms