RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 EMC6Q9BV81 110 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 FNDC11Q9BVV2 318 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 PRRG3Q9BZD7 231 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ULBP2Q9BZM5 246 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 C6orf62Q9GZU0 229 aaPredicted RBP7.6□□□□□ -1.19
TDP1-208ENST00000553989 MS4A5Q9H3V2 200 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ABCB10Q9NRK6 738 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 HIF1ANQ9NWT6 349 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 B3GAT1Q9P2W7 334 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 DUSP13Q9UII6 198 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 SLC13A4Q9UKG4 626 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 FZR1Q9UM11 496 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 LOC100506127A0A0U1RQW1 187 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 A0A1B0GWA3 101 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 ZNF726A6NNF4 738 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 BOLA2-SMG1P6H3BVE0 249 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 PPIHO43447 177 aaKnown RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 TRAF3IP2O43734 574 aaPredicted RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 OR10H3O60404 316 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 VENTXO95231 258 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 OPN1SWP03999 348 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 MSMBP08118 114 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 FAM157BP0CG42 384 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 HSMCR30P0CW71 290 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 GAAP10253 952 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 ACHEP22303 614 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 AHCYP23526 432 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 POU1F1P28069 291 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 MLLT11Q13015 90 aaPredicted RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 CAMK2DQ13557 499 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 MFSD13AQ14CX5 517 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 MED22Q15528 200 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 DUSP7Q16829 419 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 NKPD1Q17RQ9 610 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 ALKBH6Q3KRA9 238 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 ENTPD8Q5MY95 495 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 PHYHD1Q5SRE7 291 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 C1orf94Q6P1W5 598 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 FAHD2BQ6P2I3 314 aaPredicted RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 CCDC190Q86UF4 302 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 C20orf196Q8IYI0 205 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 TMEM123Q8N131 208 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 C3orf56Q8N813 242 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 OR51F2Q8NH61 342 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 DNAJA4Q8WW22 397 aaPredicted RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 RDH5Q92781 318 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 RPL3LQ92901 407 aaKnown RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 FAHD2AQ96GK7 314 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 COQ7Q99807 217 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 FOXB1Q99853 325 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 SLC30A2Q9BRI3 323 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 CHCHD6Q9BRQ6 235 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 PLA2G12AQ9BZM1 189 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 OR51E2Q9H255 320 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 ANKRD19PQ9H560 264 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 AMBNQ9NP70 447 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 MED29Q9NX70 200 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 TREM2Q9NZC2 230 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 DIMT1Q9UNQ2 313 aaKnown RBP7.59□□□□□ -1.19
TDP1-208ENST00000553989 CHST2Q9Y4C5 530 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 SVEP1Q4LDE5 3571 aa7.59□□□□□ -1.19
TDP1-208ENST00000553989 A0A087WUJ7 227 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 A0A0A6YYJ9 748 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 FAM157AC9JC47 383 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 H3BN98 237 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 FFAR1O14842 300 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 TPD52L2O43399 206 aaKnown RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 SPRY1O43609 319 aaPredicted RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 ENTPD6O75354 484 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 UBL3O95164 117 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 OR6A2O95222 327 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 PTHP01270 115 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 IL1AP01583 271 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 TFP02787 698 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 HPXP02790 462 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 HMGN1P05114 100 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 NAT2P11245 290 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 HLA-DOBP13765 273 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 COL8A2P25067 703 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 PTBP1P26599 531 aaKnown RBP eCLIP7.58□□□□□ -1.2
TDP1-208ENST00000553989 HTR2AP28223 471 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 PRKAR1BP31321 381 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 GLRXP35754 106 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 CSNK1A1P48729 337 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 EVX1P49640 407 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 RGS8P57771 180 aaPredicted RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 SELENOVP59797 346 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 RAB1AP62820 205 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 PUDPQ08623 228 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 SEC23BQ15437 767 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 TSTQ16762 297 aaKnown RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 ELFN2Q5R3F8 820 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 RGS7BPQ6MZT1 257 aaPredicted RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 ULK3Q6PHR2 472 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 RRM2BQ7LG56 351 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 AKAP14Q86UN6 197 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 CLDN22Q8N7P3 220 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 ADPRHL1Q8NDY3 354 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 OR9Q2Q8NGE9 314 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 SNX33Q8WV41 574 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms