RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CCDC115Q96NT0 180 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TRNT1Q96Q11 434 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TBX15Q96SF7 602 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PRSS27Q9BQR3 290 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 OR2J1Q9GZK6 312 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SEMA6AQ9H2E6 1030 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF385DQ9H6B1 395 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 WDR55Q9H6Y2 383 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PATZ1Q9HBE1 687 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 MEPEQ9NQ76 525 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TCF7L2Q9NQB0 619 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 HINT3Q9NQE9 182 aaKnown RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 POLE3Q9NRF9 147 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 EXD2Q9NVH0 621 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM38BQ9NVV0 291 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 NKIRAS2Q9NYR9 191 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SLC25A37Q9NYZ2 338 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 UBAP1Q9NZ09 502 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PSMC3IPQ9P2W1 217 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 CTSZQ9UBR2 303 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 DUX4Q9UBX2 424 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 BTNL2Q9UIR0 455 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SIGLEC9Q9Y336 463 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 NPTNQ9Y639 398 aa2.59□□□□□ -1.99
SLIRP-202ENST00000553981 SPIN1Q9Y657 262 aaPredicted RBP2.59□□□□□ -1.99
SLIRP-202ENST00000553981 PPIAL4EA0A075B759 164 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PPIAL4CA0A0B4J2A2 164 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 A0A0B4J2E0 115 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CENPVL3A0A0U1RRI6 287 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 A0A1B0GX12 115 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 A0A1W2PPW3 197 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CEACAM18A8MTB9 384 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 TMEM114B3SHH9 223 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 C11orf98E9PRG8 122 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PPIAL4DF5H284 164 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 H3BQF6 201 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 J3QLI3 93 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 COPEO14579 308 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 MLNRO43193 412 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 DHHO43323 396 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 TRMUO75648 421 aaKnown RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 SERPINI2O75830 405 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 KRT33AO76009 404 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 VAMP5O95183 116 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 SLC2A10O95528 541 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CYB5R3P00387 301 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 IGHMP01871 453 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LCATP04180 440 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LCKP06239 509 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 DBIP07108 87 aaKnown RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 BPGMP07738 259 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CD55P08174 381 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 MELTFP08582 738 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 KRT16P08779 473 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 SBK2P0C263 348 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PGA4P0DJD7 388 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PGA3P0DJD8 388 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PPIAL4FP0DN26 164 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 IL7RP16871 459 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 ZNF32P17041 273 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CXCR1P25024 350 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 HOXD3P31249 432 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 CHI3L1P36222 383 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 GNALP38405 381 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 RASSF2P50749 326 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 ZNF133P52736 654 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 CDH12P55289 794 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 RAG2P55895 527 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 BIDP55957 195 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PSG4Q00888 419 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PSG7Q13046 419 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 SELPLGQ14242 412 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 ENDOGQ14249 297 aaKnown RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 OR1Q1Q15612 314 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 RSPO1Q2MKA7 263 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 RUNDC3AQ59EK9 446 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CFAP157Q5JU67 520 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 PAGE3Q5JUK9 113 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 FAM69AQ5T7M9 428 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 SHQ1Q6PI26 577 aaKnown RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 SLC25A47Q6Q0C1 308 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 UGT2A3Q6UWM9 527 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 ZNF621Q6ZSS3 439 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 H1FNTQ75WM6 255 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 TRMT10CQ7L0Y3 403 aaKnown RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 C16orf82Q7Z2V1 217 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LCA5Q86VQ0 697 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LRRC28Q86X40 367 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 FUNDC1Q8IVP5 155 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LYG1Q8N1E2 194 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 MUC20Q8N307 709 aaPredicted RBP2.58□□□□□ -2
SLIRP-202ENST00000553981 PARP8Q8N3A8 854 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 GPR137CQ8N3F9 429 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LRRC18Q8N456 261 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 SLC22A24Q8N4F4 322 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 ZNF283Q8N7M2 679 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LSMEM1Q8N8F7 131 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 CCDC63Q8NA47 563 aa2.58□□□□□ -2
SLIRP-202ENST00000553981 LRRC75AQ8NAA5 344 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms