RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 PAICSP22234 425 aaKnown RBP17.33■□□□□ 0.36
FOXA1-203ENST00000553751 LIPAP38571 399 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 BLVRAP53004 296 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 HLXQ14774 488 aaPredicted RBP17.33■□□□□ 0.36
FOXA1-203ENST00000553751 TRIP10Q15642 601 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 TSTQ16762 297 aaKnown RBP17.33■□□□□ 0.36
FOXA1-203ENST00000553751 FAM209AQ5JX71 171 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 TMEM236Q5W0B7 351 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 FBXW12Q6X9E4 464 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 DCXRQ7Z4W1 244 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 HIPK1Q86Z02 1210 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 LRTOMTQ8WZ04 291 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 OTULINQ96BN8 352 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 HAVCR1Q96D42 359 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 C1QTNF5Q9BXJ0 243 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 GABARAPL1Q9H0R8 117 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 SAP30LQ9HAJ7 183 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 MSL2Q9HCI7 577 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 PTTG3PQ9NZH4 202 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 ABCA2Q9BZC7 2435 aa17.33■□□□□ 0.36
FOXA1-203ENST00000553751 G3V2T6 193 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 ZNF593O00488 134 aaPredicted RBP17.32■□□□□ 0.36
FOXA1-203ENST00000553751 TLX2O43763 284 aaPredicted RBP17.32■□□□□ 0.36
FOXA1-203ENST00000553751 LILRA1O75019 489 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 HMGN1P05114 100 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 RAC2P15153 192 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 OTX1P32242 354 aaPredicted RBP17.32■□□□□ 0.36
FOXA1-203ENST00000553751 CRISP1P54107 249 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 ZMAT1Q5H9K5 638 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 C6orf52Q5T4I8 152 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 PLBD1Q6P4A8 553 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 AMIGO2Q86SJ2 522 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 OR5L1Q8NGL2 311 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 ST7LQ8TDW4 575 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 MARCH7Q9H992 704 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 DECR2Q9NUI1 292 aa17.32■□□□□ 0.36
FOXA1-203ENST00000553751 LRP5LA4QPB2 252 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 PRR23D1E9PI22 279 aaPredicted RBP17.31■□□□□ 0.36
FOXA1-203ENST00000553751 M0R135 149 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 GLCEO94923 617 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 PRR23D2P0DMB1 279 aaPredicted RBP17.31■□□□□ 0.36
FOXA1-203ENST00000553751 ZNF16P17020 682 aaPredicted RBP17.31■□□□□ 0.36
FOXA1-203ENST00000553751 GSTT1P30711 240 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 CRYBB2P43320 205 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 ACTR3P61158 418 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 PPP2R2BQ00005 443 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 Q6ZR03 302 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 USP51Q70EK9 711 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 ZDHHC13Q8IUH4 622 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 SLAMF6Q96DU3 332 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 ZNF799Q96GE5 643 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 INTS14Q96SY0 518 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 OR51V1Q9H2C8 321 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 YAE1D1Q9NRH1 226 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 KRT84Q9NSB2 600 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 ZDHHC8Q9ULC8 765 aa17.31■□□□□ 0.36
FOXA1-203ENST00000553751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.3■□□□□ 0.366e-9■■□□□ 12.1
FOXA1-203ENST00000553751 IGHV1-69-2A0A0G2JMI3 117 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 EBAG9O00559 213 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 PRODHO43272 600 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 TPD52L2O43399 206 aaKnown RBP17.3■□□□□ 0.36
FOXA1-203ENST00000553751 CDC14BO60729 498 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 MITFO75030 526 aaPredicted RBP17.3■□□□□ 0.36
FOXA1-203ENST00000553751 CD55P08174 381 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 ANOS1P23352 680 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 IL2RGP31785 369 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 GPR6P46095 362 aaPredicted RBP17.3■□□□□ 0.36
FOXA1-203ENST00000553751 CHN2P52757 468 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 TPTEP56180 551 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 TMEM33P57088 247 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 CDK5R2Q13319 367 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 KDM4DQ6B0I6 523 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 NAA40Q86UY6 237 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 ERI1Q8IV48 349 aaKnown RBP17.3■□□□□ 0.36
FOXA1-203ENST00000553751 CPOQ8IVL8 374 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 TIGD4Q8IY51 512 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 BBS1Q8NFJ9 593 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 OR6N2Q8NGY6 317 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 PYDC1Q8WXC3 89 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 SPTSSAQ969W0 71 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 DIRC2Q96SL1 478 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 COPS4Q9BT78 406 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 SOX7Q9BT81 388 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 SEMA6AQ9H2E6 1030 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 CACNG2Q9Y698 323 aa17.3■□□□□ 0.36
FOXA1-203ENST00000553751 SLC2A5P22732 501 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 GZMKP49863 264 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 ESRRGP62508 458 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 KPNB1Q14974 876 aaKnown RBP17.29■□□□□ 0.36
FOXA1-203ENST00000553751 PTGES3Q15185 160 aaKnown RBP17.29■□□□□ 0.36
FOXA1-203ENST00000553751 SPRNQ5BIV9 151 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 CYB5R2Q6BCY4 276 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 OR2T2Q6IF00 324 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 DPY19L4Q7Z388 723 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 ZMYND19Q96E35 227 aaPredicted RBP17.29■□□□□ 0.36
FOXA1-203ENST00000553751 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
FOXA1-203ENST00000553751 PLEKHA8Q96JA3 519 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 TEX12Q9BXU0 123 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 JMJD1CQ15652 2540 aa17.29■□□□□ 0.36
FOXA1-203ENST00000553751 A8MV72 311 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms