RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MAP2K4P45985 399 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TGM4P49221 684 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ETV1P50549 477 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TMBIM6P55061 237 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TPTEP56180 551 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 GRB2P62993 217 aaKnown RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SIRPAP78324 504 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 FMODQ06828 376 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 PIGFQ07326 219 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SCRN3Q0VDG4 424 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 FAPQ12884 760 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 MLLT11Q13015 90 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TPBGQ13641 420 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 LY6DQ14210 128 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 RAB39AQ14964 217 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 P2RY6Q15077 328 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ST3GAL2Q16842 350 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CDONQ4KMG0 1287 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM200BQ69YZ2 307 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 RPL22L1Q6P5R6 122 aaKnown RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ANKRD16Q6P6B7 361 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 PAMR1Q6UXH9 720 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 B3GLCTQ6Y288 498 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF813Q6ZN06 617 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 Q6ZT83 130 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 FOXL2NBQ6ZUU3 175 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SLC16A14Q7RTX9 510 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 NUFIP2Q7Z417 695 aaKnown RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 DCXRQ7Z4W1 244 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SLC22A24Q8N4F4 322 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 MS4A15Q8N5U1 240 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF420Q8TAQ5 688 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SPRYD4Q8WW59 207 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ZNRF4Q8WWF5 429 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 PHYHIPQ92561 330 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 RND1Q92730 232 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 THRSPQ92748 146 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 UFD1Q92890 307 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 BOD1Q96IK1 185 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TBX5Q99593 518 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 COQ7Q99807 217 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ABHD6Q9BV23 337 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 COMMD4Q9H0A8 199 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 POLE4Q9NR33 117 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SLC7A10Q9NS82 523 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CENPMQ9NSP4 180 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 MRPL22Q9NWU5 206 aaKnown RBP4.39□□□□□ -1.71
VTI1B-202ENST00000553619 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 TAS2R16Q9NYV7 291 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CYB5R1Q9UHQ9 305 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 IKZF2Q9UKS7 526 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 FBXL3Q9UKT7 428 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 CLEC4AQ9UMR7 237 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SSR3Q9UNL2 185 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 GSTK1Q9Y2Q3 226 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 MYO15AQ9UKN7 3530 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 LAMA1P25391 3075 aa4.39□□□□□ -1.71
VTI1B-202ENST00000553619 SPTBN4Q9H254 2564 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 NCOA6Q14686 2063 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 IGKV1D-43A0A0B4J1Z2 117 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TRGV8A0A0C4DH27 118 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TRBV2A0A0J9YWF9 115 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 IQCMA0A1B0GVH7 501 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 DPPA5A6NC42 116 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF878C9JN71 531 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF701M0R085 212 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OGG1O15527 345 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 SGCEO43556 437 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 PLPP2O43688 288 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 GPRIN2O60269 458 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 SEC14L2O76054 403 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 WISP2O76076 250 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TPPPO94811 219 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 INMTO95050 263 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 UBL3O95164 117 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 APOL3O95236 402 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 HLA-DPB1P04440 258 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 LCKP06239 509 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 GAAP10253 952 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 COX5BP10606 129 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CD36P16671 472 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CPEP16870 476 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF12P17014 697 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CELP19835 753 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 GALP22466 123 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 EDNRAP25101 427 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CDAP32320 146 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 RGS6P49758 472 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CCR9P51686 369 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 HCCSP53701 268 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR12D2P58182 307 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 UBE2NP61088 152 aaKnown RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 HIST1H3AP68431 136 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ARF1P84077 181 aaKnown RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CD83Q01151 205 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ROM1Q03395 351 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF85Q03923 595 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 PMPCAQ10713 525 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms