RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SHFQ7M4L6 423 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 NEU4Q8WWR8 484 aaPredicted RBP19.51■□□□□ 0.71
TDP1-206ENST00000553569 ZNF799Q96GE5 643 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 COG8Q96MW5 612 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 DLL4Q9NR61 685 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 HIVEP1P15822 2718 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 IGHV4-30-2A0A087WSY4 118 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 ZNF878C9JN71 531 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 TIMM8AO60220 97 aaPredicted RBP19.5■□□□□ 0.71
TDP1-206ENST00000553569 MRPL3P09001 348 aaKnown RBP19.5■□□□□ 0.71
TDP1-206ENST00000553569 MOGQ16653 247 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 NAA40Q86UY6 237 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 OR5L1Q8NGL2 311 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 FAM168AQ92567 244 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 EME1Q96AY2 570 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 AMELYQ99218 206 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 RHNO1Q9BSD3 238 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 ABHD6Q9BV23 337 aa19.5■□□□□ 0.71
TDP1-206ENST00000553569 H2AFY2Q9P0M6 372 aaPredicted RBP19.5■□□□□ 0.71
TDP1-206ENST00000553569 RNF223E7ERA6 249 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 J3QW42 95 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 MT-ND5P03915 603 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 LCATP04180 440 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 CSF3P09919 207 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 PDLIM4P50479 330 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 PRKXP51817 358 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 DSCR9P59020 149 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 PSG7Q13046 419 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 HLXQ14774 488 aaPredicted RBP19.49■□□□□ 0.71
TDP1-206ENST00000553569 RCN1Q15293 331 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 ZBTB49Q6ZSB9 765 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 FAM81AQ8TBF8 368 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 CMBLQ96DG6 245 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 C18orf12Q96KH6 178 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 TEAD3Q99594 435 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 SLC29A1Q99808 456 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 C1QTNF5Q9BXJ0 243 aa19.49■□□□□ 0.71
TDP1-206ENST00000553569 FLNAP21333 2647 aaKnown RBP19.49■□□□□ 0.71
TDP1-206ENST00000553569 MAP1AP78559 2803 aaPredicted RBP19.48■□□□□ 0.71
TDP1-206ENST00000553569 VPS13CQ709C8 3753 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 PLSCR5A0PG75 271 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 C17orf100A8MU93 164 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 DAOP14920 347 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 TUBG1P23258 451 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 MAGEB1P43366 347 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 ZNF81P51508 661 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 CDC42P60953 191 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 EFNB1P98172 346 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 AADACL4Q5VUY2 407 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 NXNL2Q5VZ03 156 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 OTOSQ8NHW6 89 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 THEM6Q8WUY1 208 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 COX4I2Q96KJ9 171 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 MBOAT4Q96T53 435 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 KCNJ15Q99712 375 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 TOR3AQ9H497 397 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 TUBG2Q9NRH3 451 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 PURGQ9UJV8 347 aaKnown RBP19.48■□□□□ 0.71
TDP1-206ENST00000553569 KLHDC2Q9Y2U9 406 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 N6AMT1Q9Y5N5 214 aa19.48■□□□□ 0.71
TDP1-206ENST00000553569 ZSCAN5BA6NJL1 495 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 SPRY3O43610 288 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 NCR1O76036 304 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 LYNP07948 512 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 SLC2A1P11166 492 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 HSD11B1P28845 292 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 SLC15A1P46059 708 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 MMP15P51511 669 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 GRB2P62993 217 aaKnown RBP19.47■□□□□ 0.71
TDP1-206ENST00000553569 COLCA1Q6ZS62 124 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 MEPCEQ7L2J0 689 aaKnown RBP19.47■□□□□ 0.71
TDP1-206ENST00000553569 SLC16A9Q7RTY1 509 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 GID4Q8IVV7 300 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 ZNF283Q8N7M2 679 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 ZNF454Q8N9F8 522 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 MAPK1IP1LQ8NDC0 245 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 C10orf105Q8TEF2 133 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 UBASH3BQ8TF42 649 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 RNF133Q8WVZ7 376 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 MYOZ1Q9NP98 299 aaPredicted RBP19.47■□□□□ 0.71
TDP1-206ENST00000553569 IMPAD1Q9NX62 359 aa19.47■□□□□ 0.71
TDP1-206ENST00000553569 SLC22A31A6NKX4 558 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 LYNX1G3V0Z9 82 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 HPXP02790 462 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 INHBBP09529 407 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 LYNX1P0DP58 116 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 ANPEPP15144 967 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 OTX1P32242 354 aaPredicted RBP19.46■□□□□ 0.71
TDP1-206ENST00000553569 CX3CR1P49238 355 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 HCCSP53701 268 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 PRSS12P56730 875 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 TRIP10Q15642 601 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 TSTQ16762 297 aaKnown RBP19.46■□□□□ 0.71
TDP1-206ENST00000553569 SNAI3Q3KNW1 292 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 DRAM2Q6UX65 266 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 OR5AS1Q8N127 324 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 CNN2Q99439 309 aaKnown RBP19.46■□□□□ 0.71
TDP1-206ENST00000553569 REG4Q9BYZ8 158 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 MSL2Q9HCI7 577 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 DNAJC27Q9NZQ0 273 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms