RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GTF3AQ92664 365 aaKnown RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 ELMOD3Q96FG2 381 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 TSSK2Q96PF2 358 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 ERMAPQ96PL5 475 aaPredicted RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 SAP30LQ9HAJ7 183 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 ELOVL3Q9HB03 270 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 B9D1Q9UPM9 204 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 LYVE1Q9Y5Y7 322 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 AUP1Q9Y679 476 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 OR6C6A6NF89 314 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 IDH3BO43837 385 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 DOK2O60496 412 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 HIST1H1CP16403 213 aaKnown RBP9.96□□□□□ -0.82
SRP54-203ENST00000553544 TUBG1P23258 451 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 CRABP1P29762 137 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 LIPAP38571 399 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 HTR5AP47898 357 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ZNF81P51508 661 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ARHGDIAP52565 204 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 GLO1Q04760 184 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 SLC9A3R2Q15599 337 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 RPL13AP3Q6NVV1 102 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 LEG1Q6P5S2 330 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ARL9Q6T311 187 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ZNF620Q6ZNG0 422 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 CCDC121Q6ZUS5 278 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ZBTB46Q86UZ6 589 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 BCL6BQ8N143 479 aaPredicted RBP9.96□□□□□ -0.82
SRP54-203ENST00000553544 OR6V1Q8N148 313 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ABHD4Q8TB40 342 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 TMIGD2Q96BF3 282 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 SAMD8Q96LT4 415 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 C1orf147Q96MC9 270 aaPredicted RBP9.96□□□□□ -0.82
SRP54-203ENST00000553544 NMNAT3Q96T66 252 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 DDOQ99489 341 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 RERGLQ9H628 205 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 TUBG2Q9NRH3 451 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 UBAP1Q9NZ09 502 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 ASH2LQ9UBL3 628 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 CACNG2Q9Y698 323 aa9.96□□□□□ -0.82
SRP54-203ENST00000553544 DHRS12A0PJE2 317 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ISPDA4D126 451 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 OR6C68A6NDL8 312 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ZSCAN5BA6NJL1 495 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 TNFRSF11BO00300 401 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 EBAG9O00559 213 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 RER1O15258 196 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 CIB2O75838 187 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ABHD16AO95870 558 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 GPANK1O95872 356 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 IGHV1-46P01743 117 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 MDKP21741 143 aaPredicted RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 MTNR1AP48039 350 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 PSG7Q13046 419 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ZNF154Q13106 437 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ZNF362Q5T0B9 420 aaPredicted RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 PGM2L1Q6PCE3 622 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 C16orf87Q6PH81 154 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 DNM1P34Q6PK57 102 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ZNF771Q7L3S4 317 aaPredicted RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 DEFB108BQ8NET1 73 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 SLC26A10Q8NG04 563 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 OR9Q2Q8NGE9 314 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 OR1F12Q8NHA8 337 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 SLC7A6Q92536 515 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 IFT27Q9BW83 186 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 EGLN1Q9GZT9 426 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 POFUT1Q9H488 388 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 EGLN3Q9H6Z9 239 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 REEP1Q9H902 201 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 SRA1Q9HD15 236 aaKnown RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 MMP26Q9NRE1 261 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 CYSLTR2Q9NS75 346 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 IL20Q9NYY1 176 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 CGGBP1Q9UFW8 167 aaPredicted RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 ATPIF1Q9UII2 106 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 PURGQ9UJV8 347 aaKnown RBP9.95□□□□□ -0.82
SRP54-203ENST00000553544 ZDHHC8Q9ULC8 765 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 STARD10Q9Y365 291 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 MMP24Q9Y5R2 645 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 LHFPL6Q9Y693 200 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 ARHGAP32A7KAX9 2087 aa9.95□□□□□ -0.82
SRP54-203ENST00000553544 PRKDCP78527 4128 aaKnown RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 A0A1B0GUS0 222 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 PLSCR5A0PG75 271 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 BHLHE40O14503 412 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 RENP00797 406 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 GASTP01350 101 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 CD55P08174 381 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 SBK2P0C263 348 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 KITLGP21583 273 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 DBPQ10586 325 aaPredicted RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 COX10Q12887 443 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 MEP1BQ16820 701 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 RSPO1Q2MKA7 263 aaPredicted RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 KLF17Q5JT82 389 aaPredicted RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 C17orf107Q6ZR85 190 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 RASSF6Q6ZTQ3 369 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 JAZF1Q86VZ6 243 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms