RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ZNF716A6NP11 495 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 EFCAB9A8MZ26 197 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF587BE7ETH6 402 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 PLPP3O14495 311 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 FMO6PO60774 539 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 UPK3AO75631 287 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 CTAG2O75638 210 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 OR7A10O76100 309 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 NDUFB4O95168 129 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 OR5F1O95221 314 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 GADD45GO95257 159 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 BCL10O95999 233 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 HPRP00739 348 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 MT-ND1P03886 318 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 H1F0P07305 194 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 CD79AP11912 226 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 HLA-DOBP13765 273 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ITGA2P17301 1181 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 DNASE1P24855 282 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 GCH1P30793 250 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 AQP2P41181 271 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 GPR4P46093 362 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 CRYBA2P53672 197 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 UGT2B15P54855 530 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 LINC00205P59089 165 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 UBE2NP61088 152 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 TUBA1BP68363 451 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 H3F3AP84243 136 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SPIBQ01892 262 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ROR2Q01974 943 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 TGFBR3Q03167 851 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 CHRNB3Q05901 458 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 KEAP1Q14145 624 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 HNF4GQ14541 408 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 MELKQ14680 651 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SLC17A1Q14916 467 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 P2RY6Q15077 328 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 PDK3Q15120 406 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 PPA1Q15181 289 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SGCAQ16586 387 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 FBXL19-AS1Q494R0 122 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 TFAP2EQ6VUC0 442 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 WDR88Q6ZMY6 472 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 COLCA1Q6ZS62 124 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 Q6ZT83 130 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 Q6ZTK2 550 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SLC35D2Q76EJ3 337 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ABHD12BQ7Z5M8 362 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 OAFQ86UD1 273 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 CDC20BQ86Y33 519 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 EPHX4Q8IUS5 362 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF433Q8N7K0 673 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 POMGNT2Q8NAT1 580 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SYT14Q8NB59 555 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SCCPDHQ8NBX0 429 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 OR5J2Q8NH18 312 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 GEMIN6Q8WXD5 167 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SGCDQ92629 289 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 CCDC124Q96CT7 223 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 BPIFA2Q96DR5 249 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ELMOD3Q96FG2 381 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 PGAM5Q96HS1 289 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 TNFRSF13CQ96RJ3 184 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 KCNS3Q9BQ31 491 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SRSF8Q9BRL6 282 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM43Q9BTV4 400 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 KCNN2Q9H2S1 579 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 SLCO5A1Q9H2Y9 848 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 RNF121Q9H920 327 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 C12orf10Q9HB07 376 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 DCAF13Q9NV06 445 aaKnown RBP4.07□□□□□ -1.76
ATXN3-220ENST00000553491 FBXL17Q9UF56 701 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 B3GALT5Q9Y2C3 310 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 PLEKHA6Q9Y2H5 1048 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 ARFGEF3Q5TH69 2177 aa4.07□□□□□ -1.76
ATXN3-220ENST00000553491 DYSFO75923 2080 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 ITPR2Q14571 2701 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 IGKV3D-15A0A087WSY6 115 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 TRAV27A0A087WT01 109 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 FTCDNL1E5RQL4 147 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 TIMM23O14925 209 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 ARPC2O15144 300 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 OR10H3O60404 316 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 NPIPB7O75200 414 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 LYPD3O95274 346 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 MT-ATP6P00846 226 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 THY1P04216 161 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 FABP3P05413 133 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 T-ENOLP0DO92 83 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 PSG1P11464 419 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 HSD17B1P14061 328 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 RRM2P31350 389 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 ACVR1BP36896 505 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 GUCA1AP43080 201 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-220ENST00000553491 CSNK1A1P48729 337 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 SMIM11AP58511 58 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 PRPS1P60891 318 aa4.06□□□□□ -1.76
ATXN3-220ENST00000553491 ERVK-25P63136 954 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms