RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 GATCO43716 136 aaKnown RBP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 SUPT7LO94864 414 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 KLF8O95600 359 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 RETP07949 1114 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 GIG44P09565 113 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 PGA5P0DJD9 388 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 IGFBP3P17936 291 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 GABRG2P18507 467 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 CNR1P21554 472 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 PFN2P35080 140 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 PCK1P35558 622 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 CEACAM3P40198 252 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 CRATP43155 626 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 NCBP2P52298 156 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 RPL31P62899 125 aaKnown RBP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 PON3Q15166 354 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 TAL2Q16559 108 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 CHRFAM7AQ494W8 412 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 FAHD1Q6P587 224 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF493Q6ZR52 646 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 STRADAQ7RTN6 431 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 SSX6Q7RTT6 188 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 GTF2H4Q92759 462 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 SEH1LQ96EE3 360 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 SGTBQ96EQ0 304 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 TMEM101Q96IK0 257 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF681Q96N22 645 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 TSNAXQ99598 290 aaKnown RBP4.21□□□□□ -1.74
SCFD1-208ENST00000553278 CIB1Q99828 191 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 UQCC2Q9BRT2 126 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 C1orf198Q9H425 327 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 PARVGQ9HBI0 331 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 SLCO1B3Q9NPD5 702 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 RMND1Q9NWS8 449 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 MS4A12Q9NXJ0 267 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 PCYOX1Q9UHG3 505 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 CES1P1Q9UKY3 287 aa4.21□□□□□ -1.74
SCFD1-208ENST00000553278 TRAV8-7A0A075B6U6 113 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 KLF18A0A0U1RQI7 1052 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 TVP23AA6NH52 213 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 ZFP92A6NM28 416 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 H7C1H1 209 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 LDOC1O95751 146 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-208ENST00000553278 PGA4P0DJD7 388 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 PGA3P0DJD8 388 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 ERGP11308 486 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 MYL9P24844 172 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 HCCSP53701 268 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 RPL18AQ02543 176 aaKnown RBP4.2□□□□□ -1.74
SCFD1-208ENST00000553278 IFFO1Q0D2I5 559 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 SMARCB1Q12824 385 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF266Q14584 549 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 MAD2L1BPQ15013 274 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-208ENST00000553278 GUCA2BQ16661 112 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 TTLL9Q3SXZ7 439 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 GCSAMLQ5JQS6 135 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 CCDC122Q5T0U0 273 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 NPWQ8N729 165 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 MDS2Q8NDY4 140 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 OR7G1Q8NGA0 311 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 MRAPQ8TCY5 172 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 DDI1Q8WTU0 396 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 LRRC29Q8WV35 223 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 CREB3L1Q96BA8 519 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 DNAJC19Q96DA6 116 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 GALNT14Q96FL9 552 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 C16orf74Q96GX8 76 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 BTN2A3PQ96KV6 586 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 CHRNA10Q9GZZ6 450 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 GFRA4Q9GZZ7 299 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 CSAG2Q9Y5P2 127 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 PDS5BQ9NTI5 1447 aa4.2□□□□□ -1.74
SCFD1-208ENST00000553278 GOLGA8JA6NMD2 632 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 K7EN84 100 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 NDUFS6O75380 124 aaKnown RBP4.19□□□□□ -1.74
SCFD1-208ENST00000553278 BGLAPP02818 100 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 GLAP06280 429 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 GNAO1P09471 354 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 GOLGA8HP0CJ92 632 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CD37P11049 281 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CD1EP15812 388 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 HTR1EP28566 365 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 OR2B6P58173 313 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 OR2B8PP59922 312 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 PPP1CBP62140 327 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 C2orf80Q0P641 193 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 PMS2P3Q13401 168 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CDKL3Q8IVW4 592 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CD177Q8N6Q3 437 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CDRT4Q8N9R6 151 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 MAPK1IP1LQ8NDC0 245 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 OR10W1Q8NGF6 305 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 OR10Z1Q8NGY1 313 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 LRRC45Q96CN5 670 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 NAF1Q96HR8 494 aaKnown RBP4.19□□□□□ -1.74
SCFD1-208ENST00000553278 MAGEB18Q96M61 343 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 RNF145Q96MT1 663 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CATSPER2Q96P56 530 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 OSBPL11Q9BXB4 747 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 HDHD2Q9H0R4 259 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms