RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 ABLIM2Q6H8Q1 611 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 C20orf196Q8IYI0 205 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 GJC3Q8NFK1 279 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 OR10S1Q8NGN2 331 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CALHM2Q9HA72 323 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 G6PC2Q9NQR9 355 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 PLSCR3Q9NRY6 295 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 EMC3Q9P0I2 261 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 SPATA2Q9UM82 520 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CAMK2AQ9UQM7 478 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 RCE1Q9Y256 329 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 B4GALT1P15291 398 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 TNFSF10P50591 281 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 MMP16P51512 607 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CLDN18P56856 261 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ZNF121P58317 390 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 LSM6P62312 80 aaKnown RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 FREM1Q5H8C1 2179 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 UBE2NLQ5JXB2 153 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 RSBN1Q5VWQ0 802 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CCBE1Q6UXH8 406 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 FAM57BQ71RH2 274 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ABHD12BQ7Z5M8 362 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 IZUMO1Q8IYV9 350 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 PLPP7Q8NBV4 271 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 FNDC9Q8TBE3 224 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ENKURQ8TC29 256 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ASB5Q8WWX0 329 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 NIPAL2Q9H841 368 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 PLEKHA1Q9HB21 404 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CYSLTR2Q9NS75 346 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 TAS2R4Q9NYW5 299 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 SPEF1Q9Y4P9 236 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 LIPGQ9Y5X9 500 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 TRBV5-7A0A0A0MS05 114 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CYTIPO60759 359 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ZNF708P17019 499 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 GRB2P62993 217 aaKnown RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 SPOCK1Q08629 439 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CLN3Q13286 438 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 CEACAM16Q2WEN9 425 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 IGF2-ASQ6U949 168 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 SERPINA12Q8IW75 414 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 JAGN1Q8N5M9 183 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ZFP62Q8NB50 900 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 SETD6Q8TBK2 473 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 OR51E1Q8TCB6 317 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ZNF837Q96EG3 531 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 PGAM5Q96HS1 289 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 FAM71F1Q96KD3 344 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 GFI1Q99684 422 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 NKX3-1Q99801 234 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 MOB1AQ9H8S9 216 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 C12orf4Q9NQ89 552 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-210ENST00000553116 ACACAQ13085 2346 aa7.3□□□□□ -1.24
RAB5B-210ENST00000553116 TRGV5A0A0B4J1U4 118 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 TM4SF5O14894 197 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 KLK10O43240 276 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 EEF1E1O43324 174 aaKnown RBP7.29□□□□□ -1.24
RAB5B-210ENST00000553116 CRYZL1O95825 349 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 ACSM4P0C7M7 580 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 ZNF20P17024 532 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 ADRA2CP18825 462 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 C9orf135Q5VTT2 229 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 PYHIN1Q6K0P9 492 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 ASB18Q6ZVZ8 466 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 NRARPQ7Z6K4 114 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 LILRB4Q8NHJ6 448 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 DACT3Q96B18 629 aaPredicted RBP7.29□□□□□ -1.24
RAB5B-210ENST00000553116 WACQ9BTA9 647 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 FAM206AQ9NX38 181 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 PAQR5Q9NXK6 330 aaPredicted RBP7.29□□□□□ -1.24
RAB5B-210ENST00000553116 TBC1D24Q9ULP9 559 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 DOCK7Q96N67 2140 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 DCDC2BA2VCK2 349 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 SRSF10O75494 262 aaKnown RBP7.29□□□□□ -1.24
RAB5B-210ENST00000553116 GLSO94925 669 aaPredicted RBP7.29□□□□□ -1.24
RAB5B-210ENST00000553116 PTBP1P26599 531 aaKnown RBP eCLIP7.29□□□□□ -1.244e-8■■■■■ 36.6
RAB5B-210ENST00000553116 FOXC1Q12948 553 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 KCNMB1Q16558 191 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 C21orf62-AS1Q17RA5 79 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 GLT8D1Q68CQ7 371 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 LINGO2Q7L985 606 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 KRT74Q7RTS7 529 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 LRRTM1Q86UE6 522 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 ELMOD2Q8IZ81 293 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 SYNPRQ8TBG9 265 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 RFT1Q96AA3 541 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 PHF21AQ96BD5 680 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 SLC22A4Q9H015 551 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 SLCO5A1Q9H2Y9 848 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 PPP1R3EQ9H7J1 279 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 AKAP13Q12802 2813 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 SSX4O60224 188 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 TSPAN9O75954 239 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 FARS2O95363 451 aaKnown RBP7.29□□□□□ -1.24
RAB5B-210ENST00000553116 TTRP02766 147 aa7.29□□□□□ -1.24
RAB5B-210ENST00000553116 SPNP16150 400 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms