RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PTCHD4Q6ZW05 846 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 HS3ST5Q8IZT8 346 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 LRRC18Q8N456 261 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 ATG16L2Q8NAA4 619 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 OR4K13Q8NH42 304 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 OR5K1Q8NHB7 308 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 KLF14Q8TD94 323 aaPredicted RBP10.02□□□□□ -0.81
CKAP4-202ENST00000552828 CCL17Q92583 94 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 NABP1Q96AH0 204 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 NIPSNAP1Q9BPW8 284 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 TSSK6Q9BXA6 273 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 EGLN1Q9GZT9 426 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 SYT4Q9H2B2 425 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 RERGLQ9H628 205 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 CYSLTR2Q9NS75 346 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 CGGBP1Q9UFW8 167 aaPredicted RBP10.02□□□□□ -0.81
CKAP4-202ENST00000552828 BAIAP2Q9UQB8 552 aa10.02□□□□□ -0.81
CKAP4-202ENST00000552828 POLR3KQ9Y2Y1 108 aaPredicted RBP10.02□□□□□ -0.81
CKAP4-202ENST00000552828 A0A1W2PPL8 197 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 PLSCR5A0PG75 271 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 ZSCAN5BA6NJL1 495 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 G3V2T6 193 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 H3BN98 237 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 H3BSA7 217 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 BHLHE40O14503 412 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 TMPRSS2O15393 492 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 SPRY3O43610 288 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 SLC16A7O60669 478 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 KHDRBS3O75525 346 aaKnown RBP10.01□□□□□ -0.81
CKAP4-202ENST00000552828 SOX14O95416 240 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 CD55P08174 381 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 HIST1H1CP16403 213 aaKnown RBP10.01□□□□□ -0.81
CKAP4-202ENST00000552828 CTLA4P16410 223 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
CKAP4-202ENST00000552828 CRABP1P29762 137 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 GCH1P30793 250 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 MPV17P39210 176 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 GLO1Q04760 184 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 FOXL1Q12952 345 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 SLC36A3Q495N2 470 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 SLC35F1Q5T1Q4 408 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 ZFP1Q6P2D0 407 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 LEG1Q6P5S2 330 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 DNM1P34Q6PK57 102 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 SHISA2Q6UWI4 295 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 FOXL2NBQ6ZUU3 175 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 AMIGO2Q86SJ2 522 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 LNX2Q8N448 690 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 ICA1LQ8NDH6 482 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 DEFB108BQ8NET1 73 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 OR2T33Q8NG76 320 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 OR52E2Q8NGJ4 325 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 OR8D4Q8NGM9 314 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 TEX47Q8TBZ9 253 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 IPCEF1Q8WWN9 437 aaPredicted RBP10.01□□□□□ -0.81
CKAP4-202ENST00000552828 PYDC1Q8WXC3 89 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 DNAJC9Q8WXX5 260 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 LRTOMTQ8WZ04 291 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 DIRC2Q96SL1 478 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 NMNAT3Q96T66 252 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 GAL3ST1Q99999 423 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 DCLRE1BQ9H816 532 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 CCNB1IP1Q9NPC3 277 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 DDX28Q9NUL7 540 aaKnown RBP10.01□□□□□ -0.81
CKAP4-202ENST00000552828 KIF17Q9P2E2 1029 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 EIF3KQ9UBQ5 218 aaKnown RBP10.01□□□□□ -0.81
CKAP4-202ENST00000552828 ZDHHC8Q9ULC8 765 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 PCDHGB1Q9Y5G3 927 aa10.01□□□□□ -0.81
CKAP4-202ENST00000552828 CMYA5Q8N3K9 4069 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 C5orf49A4QMS7 147 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 FOXH1O75593 365 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 CST2P09228 141 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 OSMP13725 252 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF32P17041 273 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 MSR1P21757 451 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 CCNOP22674 350 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 POU1F1P28069 291 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 LAP3P28838 519 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 GDI2P50395 445 aaKnown RBP10□□□□□ -0.81
CKAP4-202ENST00000552828 PCBD1P61457 104 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 LCN2P80188 198 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 PSG4Q00888 419 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 KHDRBS1Q07666 443 aaKnown RBP eCLIP10□□□□□ -0.81
CKAP4-202ENST00000552828 SPATA46Q5T0L3 261 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 DOK3Q7L591 496 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 ZDHHC13Q8IUH4 622 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 GLB1L2Q8IW92 636 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 SLC25A40Q8TBP6 338 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 C22orf15Q8WYQ4 148 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 CENPNQ96H22 339 aaPredicted RBP10□□□□□ -0.81
CKAP4-202ENST00000552828 OR2J1Q9GZK6 312 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 NUAK2Q9H093 628 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 ZMAT3Q9HA38 289 aaKnown RBP10□□□□□ -0.81
CKAP4-202ENST00000552828 SRA1Q9HD15 236 aaKnown RBP10□□□□□ -0.81
CKAP4-202ENST00000552828 POLE4Q9NR33 117 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 B9D1Q9UPM9 204 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 COA3Q9Y2R0 106 aaPredicted RBP10□□□□□ -0.81
CKAP4-202ENST00000552828 LRRC42Q9Y546 428 aa10□□□□□ -0.81
CKAP4-202ENST00000552828 WNK2Q9Y3S1 2297 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 OR6C68A6NDL8 312 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms