RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SPTSSAQ969W0 71 aa14.85□□□□□ -0.03
CDK4-208ENST00000551706 ZMYND19Q96E35 227 aaPredicted RBP14.85□□□□□ -0.03
CDK4-208ENST00000551706 SORCS2Q96PQ0 1159 aa14.85□□□□□ -0.03
CDK4-208ENST00000551706 OR2J1Q9GZK6 312 aa14.85□□□□□ -0.03
CDK4-208ENST00000551706 TAAR3PQ9P1P4 343 aa14.85□□□□□ -0.03
CDK4-208ENST00000551706 F5H5K5 113 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 TLX2O43763 284 aaPredicted RBP14.84□□□□□ -0.03
CDK4-208ENST00000551706 PRKYO43930 277 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 SSX4O60224 188 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 CRLF1O75462 422 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 CSF3P09919 207 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 SLC2A5P22732 501 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 TPTEP56180 551 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 EFNB1P98172 346 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 APOFQ13790 326 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 SPATA46Q5T0L3 261 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 RHOUQ7L0Q8 258 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 DPY19L4Q7Z388 723 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 TIGD4Q8IY51 512 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 ZNF454Q8N9F8 522 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 OR6N2Q8NGY6 317 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 TMEM163Q8TC26 289 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 APOBEC3DQ96AK3 386 aaPredicted RBP14.84□□□□□ -0.03
CDK4-208ENST00000551706 EME1Q96AY2 570 aa14.84□□□□□ -0.03
CDK4-208ENST00000551706 MYOZ1Q9NP98 299 aaPredicted RBP14.84□□□□□ -0.03
CDK4-208ENST00000551706 H2AFY2Q9P0M6 372 aaPredicted RBP14.84□□□□□ -0.03
CDK4-208ENST00000551706 CGGBP1Q9UFW8 167 aaPredicted RBP14.84□□□□□ -0.03
CDK4-208ENST00000551706 ZNF878C9JN71 531 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 CLPTM1O96005 669 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 POLR2IP36954 125 aaKnown RBP14.83□□□□□ -0.04
CDK4-208ENST00000551706 LIPAP38571 399 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 ALDH3B1P43353 468 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 SLC15A1P46059 708 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 CDC42P60953 191 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 TAF13Q15543 124 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 NXNL2Q5VZ03 156 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 CLEC2AQ6UVW9 174 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 DNM1P46Q6ZS02 220 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 ZBTB49Q6ZSB9 765 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 TCEANCQ8N8B7 351 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 BBS1Q8NFJ9 593 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 ST7LQ8TDW4 575 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 SLAMF6Q96DU3 332 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 TEAD3Q99594 435 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 COPS4Q9BT78 406 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 CYSLTR2Q9NS75 346 aa14.83□□□□□ -0.04
CDK4-208ENST00000551706 MYEF2Q9P2K5 600 aaKnown RBP14.83□□□□□ -0.04
CDK4-208ENST00000551706 CHD3Q12873 2000 aaKnown RBP14.83□□□□□ -0.04
CDK4-208ENST00000551706 PLSCR5A0PG75 271 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 SLC22A31A6NKX4 558 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 M0R135 149 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 ACSM4P0C7M7 580 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 PSKH1P11801 424 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 OTX1P32242 354 aaPredicted RBP14.82□□□□□ -0.04
CDK4-208ENST00000551706 GRB2P62993 217 aaKnown RBP14.82□□□□□ -0.04
CDK4-208ENST00000551706 EIF2B1Q14232 305 aaKnown RBP14.82□□□□□ -0.04
CDK4-208ENST00000551706 MAD2L1BPQ15013 274 aaPredicted RBP14.82□□□□□ -0.04
CDK4-208ENST00000551706 RSPO1Q2MKA7 263 aaPredicted RBP14.82□□□□□ -0.04
CDK4-208ENST00000551706 COLCA1Q6ZS62 124 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 GID4Q8IVV7 300 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 OR10S1Q8NGN2 331 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 OR8J1Q8NGP2 316 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 OTOSQ8NHW6 89 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 ZNF799Q96GE5 643 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 KCNJ15Q99712 375 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 C1QTNF5Q9BXJ0 243 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 TOR3AQ9H497 397 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 CENPMQ9NSP4 180 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 STARD10Q9Y365 291 aa14.82□□□□□ -0.04
CDK4-208ENST00000551706 CUBNO60494 3623 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 TRIM64A6NGJ6 449 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 TRIM64BA6NI03 449 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 ANKRD65E5RJM6 399 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 SELENOFO60613 162 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 APOC1P02654 83 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 MPV17P39210 176 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 PCGF3Q3KNV8 242 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 ZMAT1Q5H9K5 638 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 AADACL4Q5VUY2 407 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 DRAM2Q6UX65 266 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 MEPCEQ7L2J0 689 aaKnown RBP14.81□□□□□ -0.04
CDK4-208ENST00000551706 SLC16A9Q7RTY1 509 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 ZCCHC24Q8N2G6 241 aaKnown RBP14.81□□□□□ -0.04
CDK4-208ENST00000551706 RNF133Q8WVZ7 376 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 TRUB1Q8WWH5 349 aaKnown RBP14.81□□□□□ -0.04
CDK4-208ENST00000551706 HRASLS5Q96KN8 279 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 RHNO1Q9BSD3 238 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 ABHD6Q9BV23 337 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 YIPF3Q9GZM5 350 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 C8orf4Q9NR00 106 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 IMPAD1Q9NX62 359 aa14.81□□□□□ -0.04
CDK4-208ENST00000551706 ARFGEF3Q5TH69 2177 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 CCDC182A6NF36 153 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 C17orf100A8MU93 164 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 LCATP04180 440 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 LYNP07948 512 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 NAT2P11245 290 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 RAC2P15153 192 aa14.8□□□□□ -0.04
CDK4-208ENST00000551706 NAA10P41227 235 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms