RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 GNG14A0A1W2PPG7 69 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 AQP12BA6NM10 295 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 E7ESA3 106 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MS4A18H0YCH9 400 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 H3BUX3 64 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 UBXN8O00124 270 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 NPFFO15130 113 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 LDLRAD4O15165 306 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TPD52L2O43399 206 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 NDUFA2O43678 99 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SYNGR1O43759 233 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PCDH7O60245 1069 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CRCPO75575 148 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 FCN3O75636 299 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 UGT2B17O75795 530 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 AKR7A3O95154 331 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 AK1P00568 194 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CSTAP01040 98 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PDYNP01213 254 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 APOHP02749 345 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ALDOBP05062 364 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 HMGN2P05204 90 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PTMAP06454 111 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CHRM4P08173 479 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 HCKP08631 526 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 RPS17P08708 135 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 KRT16P08779 473 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MMP7P09237 267 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ANXA4P09525 319 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TFPIP10646 304 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 STMN1P16949 149 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ATP6V1C1P21283 382 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PAICSP22234 425 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TNFSF4P23510 183 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 GRK5P34947 590 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MPV17P39210 176 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 WNT5AP41221 380 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 INSL3P51460 131 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CCNG1P51959 295 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 UBE2E1P51965 193 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 POLR2HP52434 150 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 UBASH3AP57075 661 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OR2B6P58173 313 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 BRWD1-AS2P59051 145 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TBX2Q13207 712 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SNX1Q13596 522 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TSTQ16762 297 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 GSTA3Q16772 222 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TBC1D28Q2M2D7 210 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 LRRC75BQ2VPJ9 315 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ALKBH6Q3KRA9 238 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 FAM209BQ5JX69 171 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PDZK1Q5T2W1 519 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CCNJQ5T5M9 372 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 IL23RQ5VWK5 629 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ACSM2BQ68CK6 577 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM225Q6GV28 225 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 NIPAL3Q6P499 406 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SASS6Q6UVJ0 657 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 UNQ6126/PRO20091Q6UXV3 157 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 Q6ZR03 302 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SNX32Q86XE0 403 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MYLK4Q86YV6 388 aaPredicted RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SKA3Q8IX90 412 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 C20orf196Q8IYI0 205 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SPAG16Q8N0X2 631 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 RPP25LQ8N5L8 163 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 Q8N7P7 452 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SCAIQ8N9R8 606 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SCCPDHQ8NBX0 429 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OR4F6Q8NGB9 312 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OR5AU1Q8NGC0 362 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OR51D1Q8NGF3 324 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OR1J2Q8NGS2 313 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OR6S1Q8NH40 331 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MFSD8Q8NHS3 518 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 FGFBP3Q8TAT2 258 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PNPT1Q8TCS8 783 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MIPOL1Q8TD10 442 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CDS1Q92903 461 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 LHX4Q969G2 390 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MYDGFQ969H8 173 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ERGIC1Q969X5 290 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MTERF3Q96E29 417 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 FAM120BQ96EK7 910 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 POM121L2Q96KW2 1035 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 FCRL1Q96LA6 429 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 OXGR1Q96P68 337 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF607Q96SK3 696 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SDF2Q99470 211 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SEPHS2Q99611 448 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ASCL2Q99929 193 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MUC13Q9H3R2 512 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ELOVL6Q9H5J4 265 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ALG9Q9H6U8 611 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 RMND5AQ9H871 391 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SEPSECSQ9HD40 501 aaKnown RBP1.78□□□□□ -2.12
PTCH1-223ENST00000551623 EQTNQ9NQ60 294 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MIEF1Q9NQG6 463 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 PFDN4Q9NQP4 134 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms