RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 COX8CQ7Z4L0 72 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 P2RY8Q86VZ1 359 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 NR2C2APQ86WQ0 139 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LAX1Q8IWV1 398 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZCCHC24Q8N2G6 241 aaKnown RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SLC35F6Q8N357 371 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF786Q8N393 782 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TBC1D19Q8N5T2 526 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM99Q8N816 258 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TCEANCQ8N8B7 351 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 CNEP1R1Q8N9A8 125 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SMYD1Q8NB12 490 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 STEAP2Q8NFT2 490 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 OR10G8Q8NGN5 311 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 OR2V1Q8NHB1 315 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 MIPOL1Q8TD10 442 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TAF15Q92804 592 aaKnown RBP eCLIP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 GGHQ92820 318 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 RFT1Q96AA3 541 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LRRC45Q96CN5 670 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 FBXO17Q96EF6 278 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 L3HYPDHQ96EM0 354 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 C16orf58Q96GQ5 468 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ARL5BQ96KC2 179 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 RNF145Q96MT1 663 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF382Q96SR6 550 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 NAP1L3Q99457 506 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SERPINI1Q99574 410 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 POTEKPQ9BYX7 375 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 BPESC1Q9GZL8 116 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 STMN4Q9H169 189 aaPredicted RBP1.95□□□□□ -2.1
CPSF6-207ENST00000551516 METTL7AQ9H8H3 244 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SLC52A3Q9NQ40 469 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LZTFL1Q9NQ48 299 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SLC7A10Q9NS82 523 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM216Q9P0N5 145 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 OPTCQ9UBM4 332 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 VPS29Q9UBQ0 182 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PRODH2Q9UF12 536 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 PROCRQ9UNN8 238 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 SNX24Q9Y343 169 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 LYSTQ99698 3801 aa1.95□□□□□ -2.1
CPSF6-207ENST00000551516 STARD9Q9P2P6 4700 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 DYSFO75923 2080 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 A0A087WUV0 522 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ARPC4-TTLL3A0A0A6YYG9 625 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TRBV4-1A0A0J9YWV2 114 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 LOC390937A0A1W2PQ73 354 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 C5orf51A6NDU8 294 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FTCDNL1E5RQL4 147 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 RPL36A-HNRNPH2H7BZ11 118 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 NDUFS8O00217 210 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SLC1A7O00341 560 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FAAHO00519 579 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ABCD4O14678 606 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CASKO14936 926 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 RAD51CO43502 376 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TRAF3IP2O43734 574 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 UGT2B17O75795 530 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 BCAS2O75934 225 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 LYZL6O75951 148 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 PDE5AO76074 875 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OR4F21O95013 312 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 MT-ND2P03891 347 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SDC1P18827 310 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TSPAN8P19075 237 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 RPS4Y1P22090 263 aaKnown RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 AADACP22760 399 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 COL8A2P25067 703 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CRABP2P29373 138 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 HPDP32754 393 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ACAA2P42765 397 aaKnown RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 UCP2P55851 309 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CARD18P57730 90 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TGM3Q08188 693 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 LASP1Q14847 261 aaKnown RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 HFEQ30201 348 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM176BQ3YBM2 270 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 RFTN2Q52LD8 501 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 XKR7Q5GH72 579 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 PHYHD1Q5SRE7 291 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CCNJQ5T5M9 372 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TSPO2Q5TGU0 170 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 HBMQ6B0K9 141 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SLC27A4Q6P1M0 643 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 EMBQ6PCB8 327 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SLC25A47Q6Q0C1 308 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CD164L2Q6UWJ8 174 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TMPPEQ6ZT21 453 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 RFPL4BQ6ZWI9 263 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FRA10AC1Q70Z53 315 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 BHLHA15Q7RTS1 189 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OLIG3Q7RTU3 272 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 COMTD1Q86VU5 262 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 HOGA1Q86XE5 327 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF584Q8IVC4 421 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SERPINA12Q8IW75 414 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 UBQLNLQ8IYU4 475 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ZBED8Q8IZ13 594 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms