RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 A6NNC1 897 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 F5H5K5 113 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 PNPP00491 289 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 NGFP01138 241 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 H2BFMP0C1H6 154 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 SLC2A1P11166 492 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 PTAFRP25105 342 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 DCKP27707 260 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 APLNRP35414 380 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 CDH15P55291 814 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 OR12D2P58182 307 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 ERVS71-1P61550 626 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 CSNK2BP67870 215 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 NKX6-1P78426 367 aaPredicted RBP11.65□□□□□ -0.54
ERBB3-215ENST00000550828 EGR3Q06889 387 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 GALEQ14376 348 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 TBC1D28Q2M2D7 210 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 TMEM255AQ5JRV8 349 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 OR2G6Q5TZ20 316 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 COLCA1Q6ZS62 124 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF679Q8IYX0 411 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 ASB17Q8WXJ9 295 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 KCNJ15Q99712 375 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 OR51B6Q9H340 312 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 MOV10Q9HCE1 1003 aaKnown RBP11.65□□□□□ -0.54
ERBB3-215ENST00000550828 ACOXLQ9NUZ1 547 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 ZNF319Q9P2F9 582 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 IKZF2Q9UKS7 526 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 PCDHGB1Q9Y5G3 927 aa11.65□□□□□ -0.54
ERBB3-215ENST00000550828 IRGMA1A4Y4 181 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 E9PI62 339 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 M0R135 149 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 PHYHO14832 338 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 CASKO14936 926 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 GPRIN2O60269 458 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 ICMTO60725 284 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 SMPD2O60906 423 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 LALBAP00709 142 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 FAM157BP0CG42 384 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 COX6B1P14854 86 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 CCNOP22674 350 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 PAX7P23759 505 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 PSMB10P40306 273 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 CX3CR1P49238 355 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 ZNF121P58317 390 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 GRB2P62993 217 aaKnown RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 GALK2Q01415 458 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 ECH1Q13011 328 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 SNAI3Q3KNW1 292 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 LIPNQ5VXI9 398 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 KCTD18Q6PI47 426 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 RHOUQ7L0Q8 258 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 KRT77Q7Z794 578 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 STX19Q8N4C7 294 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 PPP1R14AQ96A00 147 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 PELI1Q96FA3 418 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 ZNF799Q96GE5 643 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 C4orf36Q96KX1 117 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 ESRP2Q9H6T0 727 aaKnown RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 CDH20Q9HBT6 801 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 NGBQ9NPG2 151 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 INPP5EQ9NRR6 644 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 FAM206AQ9NX38 181 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 SCN3BQ9NY72 215 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 LSM2Q9Y333 95 aaKnown RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 EXOSC1Q9Y3B2 195 aaKnown RBP11.64□□□□□ -0.55
ERBB3-215ENST00000550828 TPRKBQ9Y3C4 175 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 GRIP1Q9Y3R0 1128 aa11.64□□□□□ -0.55
ERBB3-215ENST00000550828 METTL15A6NJ78 407 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 SULT1C4O75897 302 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 PTHP01270 115 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 CD3EP07766 207 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 CHN2P52757 468 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 RIDAP52758 137 aaKnown RBP11.63□□□□□ -0.55
ERBB3-215ENST00000550828 GABARAPL2P60520 117 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 TAF13Q15543 124 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
ERBB3-215ENST00000550828 OR1J2Q8NGS2 313 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 SPRYD4Q8WW59 207 aaPredicted RBP11.63□□□□□ -0.55
ERBB3-215ENST00000550828 IPCEF1Q8WWN9 437 aaPredicted RBP11.63□□□□□ -0.55
ERBB3-215ENST00000550828 RORBQ92753 470 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 C4orf45Q96LM5 186 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 DOK1Q99704 481 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 C1QTNF5Q9BXJ0 243 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 CDCA4Q9BXL8 241 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 YTHDF1Q9BYJ9 559 aaKnown RBP11.63□□□□□ -0.55
ERBB3-215ENST00000550828 GNG8Q9UK08 70 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 STARD10Q9Y365 291 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 RNF115Q9Y4L5 304 aa11.63□□□□□ -0.55
ERBB3-215ENST00000550828 E7EQL1 145 aa11.62□□□□□ -0.55
ERBB3-215ENST00000550828 J3QLW9 94 aa11.62□□□□□ -0.55
ERBB3-215ENST00000550828 RGS10O43665 173 aa11.62□□□□□ -0.55
ERBB3-215ENST00000550828 ZNF254O75437 659 aa11.62□□□□□ -0.55
ERBB3-215ENST00000550828 CTAG2O75638 210 aa11.62□□□□□ -0.55
ERBB3-215ENST00000550828 RPP14O95059 124 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms