RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 KIR2DL5AQ8N109 375 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 Q8N7P7 452 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 OR56B2PQ8NGI1 322 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 KIR2DL5BQ8NHK3 375 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 FANK1Q8TC84 345 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 OR8B4Q96RC9 309 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 SH3GL1Q99961 368 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 SRMSQ9H3Y6 488 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 EML4Q9HC35 981 aaKnown RBP3.27□□□□□ -1.89
LIMA1-205ENST00000550592 TM9SF3Q9HD45 589 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 ADAP2Q9NPF8 381 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 ASCL3Q9NQ33 180 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 CCL28Q9NRJ3 127 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 EXD2Q9NVH0 621 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 XCL2Q9UBD3 114 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 PISDQ9UG56 409 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 MYH7P12883 1935 aa3.27□□□□□ -1.89
LIMA1-205ENST00000550592 COL6A5A8TX70 2615 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 APCP25054 2843 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 ZFC3H1O60293 1989 aaKnown RBP3.26□□□□□ -1.89
LIMA1-205ENST00000550592 ARL5CA6NH57 179 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 FAM47DPA6NHR8 397 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 K7EQS6 105 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 LAD1O00515 517 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 CCL21O00585 134 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 SLC31A2O15432 143 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 PSTPIP1O43586 416 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 MGRN1O60291 552 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 KRT6AP02538 564 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 C2P06681 752 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 GOLGA8HP0CJ92 632 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 ZNF17P17021 662 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 TCN1P20061 433 aaPredicted RBP3.26□□□□□ -1.89
LIMA1-205ENST00000550592 DRD3P35462 400 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 KCNJ2P63252 427 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 KIAA0087Q14695 138 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 PDGFRLQ15198 375 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 C6orf89Q6UWU4 347 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 COX15Q7KZN9 410 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 TMEM61Q8N0U2 210 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 FAM71E2Q8N5Q1 922 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 OR10G9Q8NGN4 311 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 STMN2Q93045 179 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 RASD2Q96D21 266 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 CYYR1Q96J86 154 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 MRPL47Q9HD33 250 aaKnown RBP3.26□□□□□ -1.89
LIMA1-205ENST00000550592 NMRK1Q9NWW6 199 aa3.26□□□□□ -1.89
LIMA1-205ENST00000550592 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
LIMA1-205ENST00000550592 MYH6P13533 1939 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 A0A1B0GUA9 196 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 PINLYPA6NC86 204 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 TRIM49D1C9J1S8 452 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 SGK1O00141 431 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 TNFSF13O75888 250 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 MOSP00540 346 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 NR2C1P13056 603 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 HPGDP15428 266 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 CRISP2P16562 243 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 RCC1P18754 421 aaPredicted RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 SLC2A5P22732 501 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 IFNA8P32881 189 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 TFPI2P48307 235 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 CSNK1EP49674 416 aaKnown RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 SH3BGRP55822 239 aaPredicted RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 ACVR1Q04771 509 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 TWF1Q12792 350 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 RNASEKQ6P5S7 137 aaKnown RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 ZNF557Q8N988 423 aaPredicted RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 NPBQ8NG41 125 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 OR1N2Q8NGR9 330 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 KCNG3Q8TAE7 436 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 PDCD6IPQ8WUM4 868 aaKnown RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 RDH5Q92781 318 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 HSFY1Q96LI6 401 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 PLIN2Q99541 437 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 KCTD14Q9BQ13 255 aaPredicted RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 TMEM59Q9BXS4 323 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 HES7Q9BYE0 225 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 ZNF302Q9NR11 478 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 ZNF225Q9UK10 706 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 TP53TG5Q9Y2B4 290 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 ACANP16112 2415 aa3.25□□□□□ -1.89
LIMA1-205ENST00000550592 PHF3Q92576 2039 aaKnown RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 FBN1P35555 2871 aaKnown RBP3.25□□□□□ -1.89
LIMA1-205ENST00000550592 PKDREJQ9NTG1 2253 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 MN1Q10571 1320 aaPredicted RBP3.24□□□□□ -1.89
LIMA1-205ENST00000550592 IGKV6D-21A0A0A0MT36 114 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 GOLGA8OA6NCC3 632 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 GOLGA8NF8WBI6 632 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 ZBTB5O15062 677 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 YKT6O15498 198 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 TRAPPC3O43617 180 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 CIB2O75838 187 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 ERLIN2O94905 339 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 SERPIND1P05546 499 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 GIPP09681 153 aaPredicted RBP3.24□□□□□ -1.89
LIMA1-205ENST00000550592 GABRG2P18507 467 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 GPR6P46095 362 aaPredicted RBP3.24□□□□□ -1.89
LIMA1-205ENST00000550592 ARPP19P56211 112 aa3.24□□□□□ -1.89
LIMA1-205ENST00000550592 ARHGAP19Q14CB8 494 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms