RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 ZNF48Q96MX3 618 aaPredicted RBP11.91□□□□□ -0.5
TPCN1-213ENST00000550543 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 NUDT16L1Q9BRJ7 211 aaKnown RBP11.91□□□□□ -0.5
TPCN1-213ENST00000550543 PRDM13Q9H4Q3 707 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 PTTG3PQ9NZH4 202 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 RHCGQ9UBD6 479 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 KCNG2Q9UJ96 466 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 COA3Q9Y2R0 106 aaPredicted RBP11.91□□□□□ -0.5
TPCN1-213ENST00000550543 POMT1Q9Y6A1 747 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 ENPP4Q9Y6X5 453 aa11.91□□□□□ -0.5
TPCN1-213ENST00000550543 TRAV40A0A0B4J280 105 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 A0A1B0GWJ7 208 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 SRRM5B3KS81 715 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 P2RY10O00398 339 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 CDC42EP2O14613 210 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 IMPA2O14732 288 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 TIMM23O14925 209 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 RER1O15258 196 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 TXNDC12O95881 172 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 RENP00797 406 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 SCG5P05408 212 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 RHCEP18577 417 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 FPR3P25089 353 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 CENPAP49450 140 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 PAX2Q02962 417 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 LIPEQ05469 1076 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 COX10Q12887 443 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
TPCN1-213ENST00000550543 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 SPERTQ8NA61 448 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 OR2AJ1Q8NGZ0 328 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 FAM162AQ96A26 154 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.5
TPCN1-213ENST00000550543 HSH2DQ96JZ2 352 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.5
TPCN1-213ENST00000550543 TMEM246Q9BRR3 403 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 CDADC1Q9BWV3 514 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 POFUT1Q9H488 388 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 FN3KRPQ9HA64 309 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 ERVK-18Q9QC07 812 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 SIGLEC7Q9Y286 467 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.5
TPCN1-213ENST00000550543 M0QZ24 198 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 FFAR1O14842 300 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 PTP4A3O75365 173 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 NDUFA7O95182 113 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 CYB5R3P00387 301 aaPredicted RBP11.89□□□□□ -0.51
TPCN1-213ENST00000550543 IGHV4-38-2P0DP08 117 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 IFNGR2P38484 337 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 HLXQ14774 488 aaPredicted RBP11.89□□□□□ -0.51
TPCN1-213ENST00000550543 FGD3Q5JSP0 725 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 SMARCD3Q6STE5 483 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 COLCA1Q6ZS62 124 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
TPCN1-213ENST00000550543 OR4C15Q8NGM1 316 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 OR10S1Q8NGN2 331 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 TBC1D15Q8TC07 691 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 SLC7A13Q8TCU3 470 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 SPRYD4Q8WW59 207 aaPredicted RBP11.89□□□□□ -0.51
TPCN1-213ENST00000550543 SSMEM1Q8WWF3 244 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
TPCN1-213ENST00000550543 C1QTNF5Q9BXJ0 243 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 NUAK2Q9H093 628 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 EFCAB1Q9HAE3 211 aa11.89□□□□□ -0.51
TPCN1-213ENST00000550543 SAMD4AQ9UPU9 718 aaKnown RBP11.89□□□□□ -0.51
TPCN1-213ENST00000550543 UNC119BA6NIH7 251 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 J3KTA2 159 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SOCS2O14508 198 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 KCNAB3O43448 404 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 IDH3BO43837 385 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 CCDC22O60826 627 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 GPANK1O95872 356 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SERPINA1P01009 418 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SLC6A6P31641 620 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 CD200P41217 278 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SLC7A2P52569 658 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 RAG2P55895 527 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 TPTEP56180 551 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
TPCN1-213ENST00000550543 TBPL2Q6SJ96 375 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 PGAP1Q75T13 922 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SLC15A3Q8IY34 581 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 FITM2Q8N6M3 262 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 POU5F2Q8N7G0 328 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 ZNF420Q8TAQ5 688 aaPredicted RBP11.88□□□□□ -0.51
TPCN1-213ENST00000550543 GATAD2BQ8WXI9 593 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SLC7A6Q92536 515 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 SPTSSAQ969W0 71 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 DACT3Q96B18 629 aaPredicted RBP11.88□□□□□ -0.51
TPCN1-213ENST00000550543 RCN3Q96D15 328 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 PITX2Q99697 317 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 ATF6BQ99941 703 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 KCTD14Q9BQ13 255 aaPredicted RBP11.88□□□□□ -0.51
TPCN1-213ENST00000550543 TRIM15Q9C019 465 aa11.88□□□□□ -0.51
TPCN1-213ENST00000550543 OPA3Q9H6K4 179 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms