RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RAE1P78406 368 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 RPL18Q07020 188 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 ACKR1Q16570 336 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 MISPQ8IVT2 679 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 FAM24BQ8N5W8 94 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 C15orf54Q8N8G6 183 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 PPP1R35Q8TAP8 253 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 TSLPQ969D9 159 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 ARHGDIGQ99819 225 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 CDH20Q9HBT6 801 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 SLC23A2Q9UGH3 650 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 FAM96BQ9Y3D0 163 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 ACKR3P25106 362 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 DVL1P1P54792 670 aaPredicted RBP14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 ELLP55199 621 aaPredicted RBP14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 CLDN17P56750 224 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 B4GALNT1Q00973 533 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 OR4S1Q8NGB4 309 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 OR5M9Q8NGP3 310 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 OR14A16Q8NHC5 309 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 TVP23CQ96ET8 276 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 MMP24Q9Y5R2 645 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 KCNE1BA0A087WTH5 132 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 HPXP02790 462 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 CTRB1P17538 263 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 ECH1Q13011 328 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 TOMM34Q15785 309 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 TMEM52BQ4KMG9 183 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 CTRB2Q6GPI1 263 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 RSPO2Q6UXX9 243 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 NANOS1Q8WY41 292 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 KCNG2Q9UJ96 466 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 PAX6P26367 422 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 TRILQ7L0X0 811 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 DOK3Q7L591 496 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 NECAP1Q8NC96 275 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 C22orf15Q8WYQ4 148 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 WBP2Q969T9 261 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 TCTN2Q96GX1 697 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 SPACA5Q96QH8 159 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 NTMQ9P121 344 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 GDF2Q9UK05 429 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 PCBP3P57721 371 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 ENDOGQ14249 297 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 GPR137Q96N19 417 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 RYDENQ9NUL5 291 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 HSPB6O14558 160 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 FGF17O60258 216 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 CST4P01036 141 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 FABP4P15090 132 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 G0S2P27469 103 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 PTCRAQ6ISU1 281 aaPredicted RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 ANKRD16Q6P6B7 361 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 CBLN2Q8IUK8 224 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF687Q8N1G0 1237 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 C19orf47Q8N9M1 422 aaKnown RBP14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 SLC38A9Q8NBW4 561 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 C17orf47Q8NEP4 570 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 OR51E1Q8TCB6 317 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 OR5V1Q9UGF6 321 aa14.35□□□□□ -0.11
RBFOX1-212ENST00000550418 APLNRP35414 380 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SRYQ05066 204 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 C17orf67Q0P5P2 114 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 MIDNQ504T8 468 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 H1FNTQ75WM6 255 aaPredicted RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 DTWD2Q8NBA8 298 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 VPS25Q9BRG1 176 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ING1Q9UK53 422 aaPredicted RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SRPK3Q9UPE1 567 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 CTGFP29279 349 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 IL10RAQ13651 578 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SLC16A14Q7RTX9 510 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ARRDC1Q8N5I2 433 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 CHAC2Q8WUX2 184 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 BCO1Q9HAY6 547 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SLC5A6Q9Y289 635 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ANKRD20A5PA0PJZ0 165 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ABLIM3O94929 683 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ZFPL1O95159 310 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 GSTP1P09211 210 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 GRB2P62993 217 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 YBX1P67809 324 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 GRINAQ7Z429 371 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ZDHHC22Q8N966 263 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 NPAS1Q99742 590 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SLCO1C1Q9NYB5 712 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SIGLEC7Q9Y286 467 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 KCNE3Q9Y6H6 103 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 ANKRD31Q8N7Z5 1873 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 XRCC2O43543 280 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 MPC2O95563 127 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 SEZ6L2Q6UXD5 910 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 TMPRSS11FQ6ZWK6 438 aa14.34□□□□□ -0.11
RBFOX1-212ENST00000550418 LHX4Q969G2 390 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms