RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 HIST1H1CP16403 213 aaKnown RBP9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZNF823P16415 610 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 SLC6A9P48067 706 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 COMPP49747 757 aaPredicted RBP9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 TPTEP56180 551 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 LCN2P80188 198 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 KRTAP27-1Q3LI81 207 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 ESCO2Q56NI9 601 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 SLC18B1Q6NT16 456 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 COLCA1Q6ZS62 124 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 C1orf229Q6ZS94 237 aaPredicted RBP9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 PIGWQ7Z7B1 504 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZDHHC21Q8IVQ6 265 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 CELF2-AS1Q8N7Q2 184 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 SEMA6DQ8NFY4 1073 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR52E2Q8NGJ4 325 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR2T4Q8NH00 348 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 ITLN1Q8WWA0 313 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 SPTSSAQ969W0 71 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 TSSK2Q96PF2 358 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 ATF6BQ99941 703 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 SLC30A2Q9BRI3 323 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 MRI1Q9BV20 369 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 MUC13Q9H3R2 512 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 POFUT1Q9H488 388 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 GCM1Q9NP62 436 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 RPRD1BQ9NQG5 326 aaKnown RBP9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 PTTG3PQ9NZH4 202 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 ACTR3BQ9P1U1 418 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 MIOXQ9UGB7 285 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 LRCH1Q9Y2L9 728 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 AUP1Q9Y679 476 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 V9GYQ6 96 aa9.17□□□□□ -0.94
VTI1BP3-201ENST00000550220 A8MXK9 166 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 F5H5K5 113 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 DCTN6O00399 190 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 PPIAL4GP0DN37 164 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 IRF2P14316 349 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 GATA4P43694 442 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 BLVRAP53004 296 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ACTG1P63261 375 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZNF154Q13106 437 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 GK3PQ14409 553 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 HLXQ14774 488 aaPredicted RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZMYND11Q15326 602 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 MEP1BQ16820 701 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 SPRNQ5BIV9 151 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR2T2Q6IF00 324 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 PGBD2Q6P3X8 592 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 BTNL3Q6UXE8 466 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 LRRN1Q6UXK5 716 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZNF620Q6ZNG0 422 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 NLRC3Q7RTR2 1065 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 DEFB107AQ8IZN7 70 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR5AS1Q8N127 324 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR11L1Q8NGX0 322 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 GCDHQ92947 438 aaPredicted RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZMYND19Q96E35 227 aaPredicted RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 PLEKHA8Q96JA3 519 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 MEGF10Q96KG7 1140 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 SIGLEC11Q96RL6 698 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZMAT3Q9HA38 289 aaKnown RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 DDX28Q9NUL7 540 aaKnown RBP9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 IL20Q9NYY1 176 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR5V1Q9UGF6 321 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 OPN4Q9UHM6 478 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 BAIAP2Q9UQB8 552 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 CDH10Q9Y6N8 788 aa9.16□□□□□ -0.94
VTI1BP3-201ENST00000550220 WNK2Q9Y3S1 2297 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 A0A1B0GWJ7 208 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 TMEM89A2RUT3 159 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR6C68A6NDL8 312 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 F5H0A9 414 aaPredicted RBP9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 TNFRSF11BO00300 401 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 CCNB2O95067 398 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 LCATP04180 440 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 WNT2P09544 360 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 ACSM4P0C7M7 580 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZNF12P17014 697 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 GGT2P36268 569 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 MMP16P51512 607 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 RAD23AP54725 363 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 GNGT1P63211 74 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 MZT1Q08AG7 82 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 TRAP1Q12931 704 aaKnown RBP9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 KCNJ8Q15842 424 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 RSPO1Q2MKA7 263 aaPredicted RBP9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 ARMCX4Q5H9R4 360 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 CORO6Q6QEF8 472 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 PGAP1Q75T13 922 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 SPRYD4Q8WW59 207 aaPredicted RBP9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 MAGIXQ9H6Y5 334 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 TMEM165Q9HC07 324 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 ARL8BQ9NVJ2 186 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 NUP50Q9UKX7 468 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms