RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.6
TROAP-211ENST00000549891 FPR3P25089 353 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 CRABP1P29762 137 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 GATA4P43694 442 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 NPY4RP50391 375 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 KCNJ8Q15842 424 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 KCNMB1Q16558 191 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 DEFB112Q30KQ8 113 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 TBPL2Q6SJ96 375 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 BRD3OSQ6XYD6 125 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 FKBP9P1Q75LS8 142 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 FITM2Q8N6M3 262 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 CELF2-AS1Q8N7Q2 184 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 BHLHE23Q8NDY6 225 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 OR11L1Q8NGX0 322 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 NRIP3Q9NQ35 241 aa11.33□□□□□ -0.6
TROAP-211ENST00000549891 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 GSTA4O15217 222 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 MLNRO43193 412 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 KRT34O76011 436 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 LIPFP07098 398 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 FUT4P22083 530 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 RPS6KA3P51812 740 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 RAG2P55895 527 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 FGF12P61328 243 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 WDR25Q64LD2 544 aaPredicted RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 FIP1L1Q6UN15 594 aaKnown RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 Q6YL49 198 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 WFDC12Q8WWY7 111 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
TROAP-211ENST00000549891 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 FAM71F1Q96KD3 344 aaPredicted RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 GPX7Q96SL4 187 aaPredicted RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 NUAK2Q9H093 628 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 KRCC1Q9NPI7 259 aaPredicted RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 SIGLEC7Q9Y286 467 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 NOP16Q9Y3C1 178 aaKnown RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
TROAP-211ENST00000549891 POMT1Q9Y6A1 747 aa11.32□□□□□ -0.6
TROAP-211ENST00000549891 VWFP04275 2813 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 A0A0G2JK05 382 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 IGHV3-64DA0A0J9YX35 117 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 A0A1B0GWJ7 208 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 M0QZ24 198 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 P2RY10O00398 339 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 CXCR6O00574 342 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 SOCS2O14508 198 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 TIMM23O14925 209 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 NDUFA7O95182 113 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 ZNF26P17031 533 aaPredicted RBP11.31□□□□□ -0.6
TROAP-211ENST00000549891 CENPAP49450 140 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 HIST1H3AP68431 136 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 MALLQ13021 153 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 PDCD1Q15116 288 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 HIST2H3PS2Q5TEC6 136 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 OLFML2AQ68BL7 652 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 DPY19L2P2Q6ZN68 376 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 HIST2H3AQ71DI3 136 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 CBLL1Q75N03 491 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 KIR3DL3Q8N743 410 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 Q8TCH9 128 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 CCT8L2Q96SF2 557 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 TRIM36Q9NQ86 728 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
TROAP-211ENST00000549891 A0A1W2PRQ8 180 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 SLC22A2O15244 555 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 PTP4A3O75365 173 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 PSMB10P40306 273 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 CD200P41217 278 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 RAD23AP54725 363 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 COX10Q12887 443 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 ECH1Q13011 328 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 DGCR6Q14129 220 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 FAM201AQ5SY85 155 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 OTPQ5XKR4 325 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 SLC7A13Q8TCU3 470 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 SSMEM1Q8WWF3 244 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 GATAD2BQ8WXI9 593 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 HSH2DQ96JZ2 352 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 TECTBQ96PL2 329 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 PCGF1Q9BSM1 259 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 SLC22A4Q9H015 551 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 MMP27Q9H306 513 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 MMADHCQ9H3L0 296 aaPredicted RBP11.3□□□□□ -0.6
TROAP-211ENST00000549891 WDR76Q9H967 626 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 TNFRSF19Q9NS68 423 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 ERVK-18Q9QC07 812 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 RPS6KA6Q9UK32 745 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 AURKCQ9UQB9 309 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 FAM32AQ9Y421 112 aaKnown RBP11.3□□□□□ -0.6
TROAP-211ENST00000549891 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms