RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 TRMT5Q32P41 509 aaKnown RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 LRRC10Q5BKY1 277 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 COA6Q5JTJ3 125 aaKnown RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 LIN9Q5TKA1 542 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 DUX4L9Q6RFH8 374 aaPredicted RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 RNF165Q6ZSG1 346 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 RALGPS2Q86X27 583 aaPredicted RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 TMEM61Q8N0U2 210 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 GATSQ8NAP1 163 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 OR4F15Q8NGB8 312 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 OR13C9Q8NGT0 318 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 MCOLN3Q8TDD5 553 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 CD300LFQ8TDQ1 290 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 FAM151AQ8WW52 585 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 GEMIN6Q8WXD5 167 aaKnown RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 APH1AQ96BI3 265 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 MAGEB18Q96M61 343 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 TM6SF2Q9BZW4 377 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 TMEM38AQ9H6F2 299 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 UGT1A7Q9HAW7 530 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 UGT1A8Q9HAW9 530 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 ACP6Q9NPH0 428 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 KCNJ16Q9NPI9 418 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 PRSS16Q9NQE7 514 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 AGPAT3Q9NRZ7 376 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 DUX4Q9UBX2 424 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.09□□□□□ -1.91
CPNE8-206ENST00000549842 ADGRA3Q8IWK6 1321 aa3.09□□□□□ -1.91
CPNE8-206ENST00000549842 SMG1Q96Q15 3661 aaKnown RBP3.09□□□□□ -1.92
CPNE8-206ENST00000549842 ZFHX3Q15911 3703 aa3.09□□□□□ -1.92
CPNE8-206ENST00000549842 GVINP1Q7Z2Y8 2422 aa3.09□□□□□ -1.92
CPNE8-206ENST00000549842 LINC00854A0A1B0GVQ3 168 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 CENPXA8MT69 81 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 PHOX2AO14813 284 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 NUPL2O15504 423 aaKnown RBP3.08□□□□□ -1.92
CPNE8-206ENST00000549842 RNF113AO15541 343 aaKnown RBP3.08□□□□□ -1.92
CPNE8-206ENST00000549842 ICOSLGO75144 302 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 AQP8O94778 261 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 SUPT7LO94864 414 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 GIPP09681 153 aaPredicted RBP3.08□□□□□ -1.92
CPNE8-206ENST00000549842 SLC26A3P40879 764 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 RFC3P40938 356 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 CD151P48509 253 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 XIAPP98170 497 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 MXD1Q05195 221 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 RPEL1Q2QD12 228 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 ZBED5Q49AG3 693 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 C9orf129Q5T035 196 aaKnown RBP3.08□□□□□ -1.92
CPNE8-206ENST00000549842 UBE2UQ5VVX9 321 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 ANKRD22Q5VYY1 191 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 ITFG1Q8TB96 612 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 ISOC2Q96AB3 205 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 FOXC2Q99958 501 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 RASL11BQ9BPW5 248 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 PYGO2Q9BRQ0 406 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 NXF3Q9H4D5 531 aaKnown RBP3.08□□□□□ -1.92
CPNE8-206ENST00000549842 CLMPQ9H6B4 373 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 DMAP1Q9NPF5 467 aaPredicted RBP3.08□□□□□ -1.92
CPNE8-206ENST00000549842 TMEM9BQ9NQ34 198 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 CCL28Q9NRJ3 127 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 SPATA31E1Q6ZUB1 1445 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 SSH2Q76I76 1423 aa3.08□□□□□ -1.92
CPNE8-206ENST00000549842 IGKV3D-20A0A0C4DH25 116 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 PRSS37A4D1T9 235 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 H0YHG0 523 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 PEX7O00628 323 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 PLPP1O14494 284 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 YKT6O15498 198 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 UTS2O95399 124 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 APOA1P02647 267 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 ARG1P05089 322 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 SMIM10L1P0DMW3 83 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 IGHV3-43DP0DP04 118 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 F2RP25116 425 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 GABRR2P28476 465 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 HRH1P35367 487 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 CFHR2P36980 270 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 CSKP41240 450 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 FGF8P55075 233 aaPredicted RBP3.07□□□□□ -1.92
CPNE8-206ENST00000549842 YWHAEP62258 255 aaKnown RBP3.07□□□□□ -1.92
CPNE8-206ENST00000549842 SEMG2Q02383 582 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 DMTNQ08495 405 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 ZNF726P1Q15940 193 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 SGCAQ16586 387 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 PAGE3Q5JUK9 113 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 TPRG1LQ5T0D9 272 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 TPTE2P1Q5T6R2 138 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 SPECC1LQ69YQ0 1117 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 FRMPD2BQ6IN97 320 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 ADNP2Q6IQ32 1131 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 C6orf89Q6UWU4 347 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 NPSR1Q6W5P4 371 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 Q6ZR54 194 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 OAFQ86UD1 273 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 ARHGAP18Q8N392 663 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 MREGQ8N565 214 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 TRAM1L1Q8N609 369 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 CCDC54Q8NEL0 328 aa3.07□□□□□ -1.92
CPNE8-206ENST00000549842 LRRC20Q8TCA0 184 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms