RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MRPS18BQ9Y676 258 aaKnown RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 PLXNB3Q9ULL4 1909 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 ANKRD20A5PA0PJZ0 165 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 STMND1H3BQB6 276 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 H7C417 338 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 TNFSF14O43557 240 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 GUSBP08236 651 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 JMJD7P0C870 316 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 GAAP10253 952 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 ZNF141Q15928 474 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 TMEM244Q5VVB8 128 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 VASH2Q86V25 355 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 OR4D6Q8NGJ1 314 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 SLC22A11Q9NSA0 550 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 MTFP1Q9UDX5 166 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 HIF3AQ9Y2N7 669 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 IL33O95760 270 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 FCGR2AP12318 317 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 OMGP23515 440 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 INSM1Q01101 510 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 SKP2Q13309 424 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 PRR18Q8N4B5 295 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 OR52N5Q8NH56 324 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 SOX7Q9BT81 388 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 C20orf24Q9BUV8 137 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 C1orf198Q9H425 327 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 PTRH2Q9Y3E5 179 aaKnown RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 E9PQ18 207 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 UPK3AO75631 287 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 PRKACAP17612 351 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 SERPINF1P36955 418 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 RBMXP38159 391 aaKnown RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 ASCL1P50553 236 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 RBM39Q14498 530 aaKnown RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 Q7L0L9 218 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 OR10G3Q8NGC4 313 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 ANGPTL6Q8NI99 470 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 CD300LFQ8TDQ1 290 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 LRRC46Q96FV0 321 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 GNRHR2Q96P88 292 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 CDCA3Q99618 268 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-209ENST00000548860 PPA2Q9H2U2 334 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 FBRSQ9HAH7 460 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 DKKL1Q9UK85 242 aa12.71□□□□□ -0.37
CACNB3-209ENST00000548860 DHRS2Q13268 280 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 PPP1R1AQ13522 171 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 NKAIN1Q4KMZ8 207 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 GRINAQ7Z429 371 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 C9orf40Q8IXQ3 194 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 SUMF1Q8NBK3 374 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 ROBO4Q8WZ75 1007 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 ZNF524Q96C55 264 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 DDIT4LQ96D03 193 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 DHRS9Q9BPW9 319 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 NICN1Q9BSH3 213 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 CNTD2Q9H8S5 307 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 PLEKHJ1Q9NW61 149 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 HAO2Q9NYQ3 351 aa12.71□□□□□ -0.38
CACNB3-209ENST00000548860 CELSR3Q9NYQ7 3312 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 SLC22A23A1A5C7 686 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 MEX3AA1L020 520 aaKnown RBP12.7□□□□□ -0.38
CACNB3-209ENST00000548860 H7C2Y5 167 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 B3GALNT1O75752 331 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
CACNB3-209ENST00000548860 H1FNTQ75WM6 255 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-209ENST00000548860 ELP5Q8TE02 316 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 CTHRC1Q96CG8 243 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 GFI1Q99684 422 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 ATRXP46100 2492 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 SLC17A2O00624 439 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-209ENST00000548860 QDPRP09417 244 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 EDN3P14138 238 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 RPA2P15927 270 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 SP6Q3SY56 376 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 MANEAQ5SRI9 462 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 HACD4Q5VWC8 232 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 FLVCR1-AS1Q8TAF5 88 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 SORCS2Q96PQ0 1159 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 SOSTQ9BQB4 213 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 ZNF700Q9H0M5 742 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 CSAG2Q9Y5P2 127 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
CACNB3-209ENST00000548860 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 PHYHO14832 338 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 LYPD3O95274 346 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 S100A6P06703 90 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 DBHP09172 617 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 CBR1P16152 277 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-209ENST00000548860 CD53P19397 219 aa12.7□□□□□ -0.38
CACNB3-209ENST00000548860 CD96P40200 585 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms