RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 NBEAL2Q6ZNJ1 2754 aa14.02□□□□□ -0.16
VPS29-204ENST00000548259 H0YL77 283 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 FBP1P09467 338 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 MMP9P14780 707 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 TGFBR2P37173 567 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 RAD23AP54725 363 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 FAM189A2Q15884 450 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 BEAN1Q3B7T3 259 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 Q6ZSV7 163 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 OR51A7Q8NH64 312 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 LRRC8CQ8TDW0 803 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 SLC7A6Q92536 515 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 SH3GL1Q99961 368 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 FN3KRPQ9HA64 309 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 TMCC3Q9ULS5 477 aa14.02□□□□□ -0.17
VPS29-204ENST00000548259 TEX13CA0A0J9YWL9 993 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 A0A0U1RQK1 487 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 G3V4G9 280 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 MLNRO43193 412 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 ADAM20O43506 726 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 ECDO95905 644 aaPredicted RBP14.01□□□□□ -0.17
VPS29-204ENST00000548259 OPN1MWP04001 364 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 SCG5P05408 212 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 OPN1MW2P0DN77 364 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 OPN1MW3P0DN78 364 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 SLC9A3P48764 834 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 SELPLGQ14242 412 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 KPRPQ5T749 579 aaPredicted RBP14.01□□□□□ -0.17
VPS29-204ENST00000548259 GLB1L2Q8IW92 636 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 SPERTQ8NA61 448 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 NPRL2Q8WTW4 380 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 PPP1R14AQ96A00 147 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 ZBTB9Q96C00 473 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 EBF4Q9BQW3 602 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 SLC22A4Q9H015 551 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 HDHD2Q9H0R4 259 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 RNF7Q9UBF6 113 aa14.01□□□□□ -0.17
VPS29-204ENST00000548259 TRAV27A0A087WT01 109 aa14□□□□□ -0.17
VPS29-204ENST00000548259 TRAV38-1A0A0B4J264 116 aa14□□□□□ -0.17
VPS29-204ENST00000548259 ZNF816-ZNF321PA0A0X1KG74 233 aa14□□□□□ -0.17
VPS29-204ENST00000548259 PRSS37A4D1T9 235 aa14□□□□□ -0.17
VPS29-204ENST00000548259 ANKRD61A6NGH8 418 aa14□□□□□ -0.17
VPS29-204ENST00000548259 EFCAB9A8MZ26 197 aa14□□□□□ -0.17
VPS29-204ENST00000548259 H7C1C5 153 aa14□□□□□ -0.17
VPS29-204ENST00000548259 LGALS8O00214 317 aa14□□□□□ -0.17
VPS29-204ENST00000548259 SHOX2O60902 331 aaPredicted RBP14□□□□□ -0.17
VPS29-204ENST00000548259 FAM20BO75063 409 aa14□□□□□ -0.17
VPS29-204ENST00000548259 KHDRBS3O75525 346 aaKnown RBP14□□□□□ -0.17
VPS29-204ENST00000548259 TSPAN9O75954 239 aa14□□□□□ -0.17
VPS29-204ENST00000548259 FUT4P22083 530 aa14□□□□□ -0.17
VPS29-204ENST00000548259 PMELP40967 661 aa14□□□□□ -0.17
VPS29-204ENST00000548259 MAGOHP61326 146 aaKnown RBP14□□□□□ -0.17
VPS29-204ENST00000548259 LCN6P62502 163 aa14□□□□□ -0.17
VPS29-204ENST00000548259 EGR3Q06889 387 aa14□□□□□ -0.17
VPS29-204ENST00000548259 MALLQ13021 153 aa14□□□□□ -0.17
VPS29-204ENST00000548259 OR8B8Q15620 311 aa14□□□□□ -0.17
VPS29-204ENST00000548259 PGM2L1Q6PCE3 622 aa14□□□□□ -0.17
VPS29-204ENST00000548259 C11orf88Q6PI97 169 aa14□□□□□ -0.17
VPS29-204ENST00000548259 Q6ZPA2 131 aa14□□□□□ -0.17
VPS29-204ENST00000548259 GJC3Q8NFK1 279 aa14□□□□□ -0.17
VPS29-204ENST00000548259 TSPEARQ8WU66 669 aa14□□□□□ -0.17
VPS29-204ENST00000548259 LZICQ8WZA0 190 aa14□□□□□ -0.17
VPS29-204ENST00000548259 ZNF570Q96NI8 536 aa14□□□□□ -0.17
VPS29-204ENST00000548259 COQ7Q99807 217 aa14□□□□□ -0.17
VPS29-204ENST00000548259 ECSITQ9BQ95 431 aa14□□□□□ -0.17
VPS29-204ENST00000548259 RERGLQ9H628 205 aa14□□□□□ -0.17
VPS29-204ENST00000548259 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
VPS29-204ENST00000548259 A0A1B0GVI7 797 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 A0A1B0GWJ7 208 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 HLA-DPB1P04440 258 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 CD14P08571 375 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 DBHP09172 617 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 TNFRSF1BP20333 461 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 EEF1B2P24534 225 aaKnown RBP13.99□□□□□ -0.17
VPS29-204ENST00000548259 CD200P41217 278 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 OR1E2P47887 323 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 ARF6P62330 175 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 CYLC2Q14093 348 aaPredicted RBP13.99□□□□□ -0.17
VPS29-204ENST00000548259 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
VPS29-204ENST00000548259 MICU2Q8IYU8 434 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 CMTM4Q8IZR5 234 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 LRRC75AQ8NAA5 344 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 MRAPQ8TCY5 172 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 SPRYD4Q8WW59 207 aaPredicted RBP13.99□□□□□ -0.17
VPS29-204ENST00000548259 PRRC1Q96M27 445 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 SIRPDQ9H106 197 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 UFSP2Q9NUQ7 469 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 AURKCQ9UQB9 309 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 KPTNQ9Y664 436 aa13.99□□□□□ -0.17
VPS29-204ENST00000548259 RER1O15258 196 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 SLC16A7O60669 478 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 PAHP00439 452 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 GABRA5P31644 462 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 GUCA2AQ02747 115 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 MAB21L1Q13394 359 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 HERPUD1Q15011 391 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 OR8G1Q15617 311 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 CCDC92Q53HC0 331 aaPredicted RBP13.98□□□□□ -0.17
VPS29-204ENST00000548259 CLEC12AQ5QGZ9 265 aa13.98□□□□□ -0.17
VPS29-204ENST00000548259 SAMD5Q5TGI4 173 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms