RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 C1QTNF5Q9BXJ0 243 aa15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 MARCH7Q9H992 704 aa15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 DDX28Q9NUL7 540 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 NKIRAS2Q9NYR9 191 aa15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 PTTG3PQ9NZH4 202 aa15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 TMEFF2Q9UIK5 374 aaPredicted RBP15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 PURGQ9UJV8 347 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-206ENST00000547764 SAC3D1A6NKF1 404 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 TIMM8AO60220 97 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 KITLGP21583 273 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 USF1P22415 310 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 COL8A2P25067 703 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 LIPAP38571 399 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 KRTAP1-1Q07627 177 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 HLXQ14774 488 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 KLHL12Q53G59 568 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 DPY19L4Q7Z388 723 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 TIGD4Q8IY51 512 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 ZNF540Q8NDQ6 660 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 BBS1Q8NFJ9 593 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 ST7LQ8TDW4 575 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 RDH5Q92781 318 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 HAVCR1Q96D42 359 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 SLAMF6Q96DU3 332 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 RAB3IPQ96QF0 476 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 CIB1Q99828 191 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 BPESC1Q9GZL8 116 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 CYSLTR2Q9NS75 346 aa15.96■□□□□ 0.15
PRPF40B-206ENST00000547764 ABCA1O95477 2261 aa15.96■□□□□ 0.14
PRPF40B-206ENST00000547764 SETD2Q9BYW2 2564 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 ZSCAN5BA6NJL1 495 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 PRODHO43272 600 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 SPRY3O43610 288 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 IGHV1-46P01743 117 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 RAC2P15153 192 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 SLC2A5P22732 501 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 IGFBP5P24593 272 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 TPTEP56180 551 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 PPP2R2BQ00005 443 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 RIN1Q13671 783 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 EIF2B1Q14232 305 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 GGTLC2Q14390 218 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 TSTQ16762 297 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 FBXW12Q6X9E4 464 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 CXXC5Q7LFL8 322 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 C10orf67Q8IYJ2 551 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 OR6N2Q8NGY6 317 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 YIPF5Q969M3 257 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 SPTSSAQ969W0 71 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 OSBPL10Q9BXB5 764 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 MSL2Q9HCI7 577 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 CENPMQ9NSP4 180 aa15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 CGGBP1Q9UFW8 167 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-206ENST00000547764 ZFHX3Q15911 3703 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 ZAR1LA6NP61 321 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 M0R135 149 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 PRKYO43930 277 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 LCATP04180 440 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 OTX1P32242 354 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 MRPS11P82912 194 aaKnown RBP15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 SLC35D3Q5M8T2 416 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 SLX4IPQ5VYV7 408 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 SPATC1Q76KD6 591 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 ZNF799Q96GE5 643 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 COPS4Q9BT78 406 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 CHODLQ9H9P2 273 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 DECR2Q9NUI1 292 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 ENOPH1Q9UHY7 261 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 ZDHHC8Q9ULC8 765 aa15.94■□□□□ 0.14
PRPF40B-206ENST00000547764 IGHV4-61A0A0C4DH41 118 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 ZNF878C9JN71 531 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 TPD52L2O43399 206 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 SELENOFO60613 162 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 CDC14BO60729 498 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 ADH4P08319 380 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 ACHEP22303 614 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 POLR2IP36954 125 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 SLC6A9P48067 706 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 RPS7P62081 194 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 EFNB1P98172 346 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 APOFQ13790 326 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 TAF13Q15543 124 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 TMEM249Q2WGJ8 235 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 ZMAT1Q5H9K5 638 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 FAM209AQ5JX71 171 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 C12orf73Q69YU5 71 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 SHFQ7M4L6 423 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 KCNJ15Q99712 375 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 RBM4BQ9BQ04 359 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 ABHD6Q9BV23 337 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 PRRG3Q9BZD7 231 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 S100A14Q9HCY8 104 aa15.93■□□□□ 0.14
PRPF40B-206ENST00000547764 M0R129 80 aa15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 TLX2O43763 284 aaPredicted RBP15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 RP2O75695 350 aa15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 PRKXP51817 358 aa15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 CDK5R2Q13319 367 aa15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 OR2T2Q6IF00 324 aa15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 DRAM2Q6UX65 266 aa15.92■□□□□ 0.14
PRPF40B-206ENST00000547764 Q6ZR03 302 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms