RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 BBS5Q8N3I7 341 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 DEFB123Q8N688 67 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 Q8N9W7 124 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 FBXO36Q8NEA4 188 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 NDRG1Q92597 394 aaKnown RBP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 ZNF75CPQ92670 426 aaPredicted RBP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 N4BP2L2Q92802 583 aaPredicted RBP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 MYDGFQ969H8 173 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 LINC00167Q96N53 147 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 FAM210AQ96ND0 272 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 RNF157Q96PX1 679 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 OR11A1Q9GZK7 315 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 FAM192AQ9GZU8 254 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 NEUROG2Q9H2A3 272 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 PPA2Q9H2U2 334 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 RANBP3Q9H6Z4 567 aaPredicted RBP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 EML4Q9HC35 981 aaKnown RBP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 VCX3AQ9NNX9 186 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 XPNPEP1Q9NQW7 623 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 MMP17Q9ULZ9 603 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 RABL2BQ9UNT1 228 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 C15orf41Q9Y2V0 281 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 Q9Y3F1 56 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 CACNG2Q9Y698 323 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 NRCAMQ92823 1304 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 TPRP12270 2363 aaKnown RBP4.12□□□□□ -1.75
NPAS3-204ENST00000546849 CFAP47Q6ZTR5 3102 aa4.12□□□□□ -1.75
NPAS3-204ENST00000546849 SIPA1L1O43166 1804 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 C12orf71A8MTZ7 269 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 TMEM114B3SHH9 223 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 F8VP50 259 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 HSD17B6O14756 317 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 NBR2O15453 112 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 B4GALT2O60909 372 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 SPAG7O75391 227 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 TNFSF13O75888 250 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 SERPINA6P08185 405 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 THRAP10827 490 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 NCF2P19878 526 aaPredicted RBP4.11□□□□□ -1.75
NPAS3-204ENST00000546849 IVDP26440 423 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 HSD17B2P37059 387 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 MAGEA6P43360 314 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 HCAR3P49019 387 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 SERPINB8P50452 374 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 DYNLT1P63172 113 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 DYNC1I2Q13409 638 aaKnown RBP4.11□□□□□ -1.75
NPAS3-204ENST00000546849 GNMTQ14749 295 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 OR2A2Q6IF42 318 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 ZFP1Q6P2D0 407 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 LRRC74BQ6ZQY2 392 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 PRSS41Q7RTY9 318 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 DHDDSQ86SQ9 333 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 RALGPS2Q86X27 583 aaPredicted RBP4.11□□□□□ -1.75
NPAS3-204ENST00000546849 ST13P4Q8IZP2 240 aaPredicted RBP4.11□□□□□ -1.75
NPAS3-204ENST00000546849 DNAAF3Q8N9W5 541 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 OR1L4Q8NGR5 311 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 BLOC1S5Q8TDH9 187 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 TCP10LQ8TDR4 215 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 FAM172AQ8WUF8 416 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 RXFP2Q8WXD0 754 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 DNAJC9Q8WXX5 260 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 FCRL1Q96LA6 429 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 EBNA1BP2Q99848 306 aaKnown RBP4.11□□□□□ -1.75
NPAS3-204ENST00000546849 PELOQ9BRX2 385 aaKnown RBP4.11□□□□□ -1.75
NPAS3-204ENST00000546849 CENPKQ9BS16 269 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 GON7Q9BXV9 100 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 IL22Q9GZX6 179 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 NMRAL1Q9HBL8 299 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 C8orf4Q9NR00 106 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 ETNK2Q9NVF9 386 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 NEU3Q9UQ49 428 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 NPTNQ9Y639 398 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 SCN9AQ15858 1988 aa4.11□□□□□ -1.75
NPAS3-204ENST00000546849 SYNJ2BP-COX16A0A087WUM0 186 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 GOLGA8MH3BSY2 632 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 NVLO15381 856 aaKnown RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 FAM189A1O60320 539 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 SERPINE1P05121 402 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 CXCL8P10145 99 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 CRABP2P29373 138 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 RPA3P35244 121 aaPredicted RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 RPL22P35268 128 aaKnown RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 CTRLP40313 264 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 PEX19P40855 299 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 CD151P48509 253 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 MARCKSL1P49006 195 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 CDH4P55283 916 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 SEC61GP60059 68 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 SLC25A11Q02978 314 aaKnown RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 ZNF763Q0D2J5 394 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 ART3Q13508 389 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 GOLGA7BQ2TAP0 167 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 LRRC10Q5BKY1 277 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 PHYHD1Q5SRE7 291 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 PDPK2PQ6A1A2 396 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 CYB5R2Q6BCY4 276 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 SPOPLQ6IQ16 392 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 MFSD6LQ8IWD5 586 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms