RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 Q7L0L9 218 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 MUC20Q8N307 709 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-212ENST00000546744 SLC35D1Q9NTN3 355 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 RASL12Q9NYN1 266 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 HAO2Q9NYQ3 351 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 PDE4DIPQ5VU43 2346 aa11.66□□□□□ -0.54
PTCH1-212ENST00000546744 ARPC3O15145 178 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 VIPR2P41587 438 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 IFITM2Q01629 132 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 TLE1Q04724 770 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 C4orf17Q53FE4 359 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF100Q8IYN0 542 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 HMGCLL1Q8TB92 370 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 LMX1AQ8TE12 382 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 SLC25A43Q8WUT9 341 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF296Q8WUU4 475 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ARHGDIGQ99819 225 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ULBP2Q9BZM5 246 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 PDFQ9HBH1 243 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 OSGIN2Q9Y236 505 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 CCDC187A0A096LP49 1063 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 SOX15O60248 233 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 EIF1BO60739 113 aaKnown RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 SEMG1P04279 462 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 GSK3AP49840 483 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 SQSTM1Q13501 440 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 MIDNQ504T8 468 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 LRRTM1Q86UE6 522 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 MMP21Q8N119 569 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 FAM174AQ8TBP5 190 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 SLC35A4Q96G79 324 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 OR5B2Q96R09 309 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 MRPS18AQ9NVS2 196 aaKnown RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 BET1LQ9NYM9 111 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 VSX1Q9NZR4 365 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 PITPNC1Q9UKF7 332 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ATXN7L1Q9ULK2 861 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 MBTPS2O43462 519 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 LDB3O75112 727 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 IL13RA2Q14627 380 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF66Q6ZN08 573 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 GRASPQ7Z6J2 395 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-212ENST00000546744 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 HLA-CQ95604 372 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 ZDHHC11Q9H8X9 412 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 CDH20Q9HBT6 801 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 A4GNTQ9UNA3 340 aa11.65□□□□□ -0.54
PTCH1-212ENST00000546744 HIST1H1CP16403 213 aaKnown RBP11.65□□□□□ -0.55
PTCH1-212ENST00000546744 NTSR1P30989 418 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 EIF1P41567 113 aaKnown RBP11.65□□□□□ -0.55
PTCH1-212ENST00000546744 ZP2Q05996 745 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 C17orf67Q0P5P2 114 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF79Q15937 498 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF385BQ569K4 471 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 GRINAQ7Z429 371 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 MARCH1Q8TCQ1 289 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 RELTQ969Z4 430 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 TOE1Q96GM8 510 aaKnown RBP11.65□□□□□ -0.55
PTCH1-212ENST00000546744 NMES1Q9C002 83 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 TAS2R4Q9NYW5 299 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 LPAR3Q9UBY5 353 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF230Q9UIE0 474 aaPredicted RBP11.65□□□□□ -0.55
PTCH1-212ENST00000546744 VDAC3Q9Y277 283 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 R4GMQ9 66 aa11.65□□□□□ -0.55
PTCH1-212ENST00000546744 MPTX1A8MV57 137 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 CTNSO60931 367 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 P04436 131 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 DBHP09172 617 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 NAT2P11245 290 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 SLC25A4P12235 298 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 SLC16A14Q7RTX9 510 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 FAM24BQ8N5W8 94 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 DERL3Q96Q80 235 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 MIXL1Q9H2W2 232 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 PLAC1Q9HBJ0 212 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 PARD6AQ9NPB6 346 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 GPR173Q9NS66 373 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 CLDND1Q9NY35 253 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 CGGBP1Q9UFW8 167 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 FZD6O60353 706 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 CRYBA1P05813 215 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 IGFBP1P08833 259 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 GNB3P16520 340 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 HRH1P35367 487 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 KIAA0040Q15053 153 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 PYCR3Q53H96 274 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 TMEM130Q8N3G9 435 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF740Q8NDX6 193 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 OR8U1Q8NH10 309 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 LCORQ96JN0 433 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 ABHD1Q96SE0 405 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 PPP1R3EQ9H7J1 279 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms