RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TMEM185AQ8NFB2 350 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 OR4N2Q8NGD1 307 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 OR52B4Q8NGK2 314 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SLC37A2Q8TED4 501 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 ST8SIA1Q92185 356 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 TSACCQ96A04 125 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 LRRC46Q96FV0 321 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SLC25A44Q96H78 314 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 MOGAT1Q96PD6 335 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 VRK1Q99986 396 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 NUDT9Q9BW91 350 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SEC11CQ9BY50 192 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 TTTY10Q9BZA0 68 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 RAB18Q9NP72 206 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 FANCFQ9NPI8 374 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 MMP26Q9NRE1 261 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 GHRLQ9UBU3 117 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 GPR160Q9UJ42 338 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 SLC5A6Q9Y289 635 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 MEMO1Q9Y316 297 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 NOP16Q9Y3C1 178 aaKnown RBP5.79□□□□□ -1.48
SNHG1-225ENST00000545920 CLDN16Q9Y5I7 305 aa5.79□□□□□ -1.48
SNHG1-225ENST00000545920 TRBV23OR9-2A0A075B6M9 112 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 C9orf170A2RU37 121 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 DBX1A6NMT0 343 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 OR2AT4A6NND4 320 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 RHPN2P1A8MT19 583 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 F5H0A9 414 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SULT2B1O00204 365 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SRSF10O75494 262 aaKnown RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SPDEFO95238 335 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 HLA-AP01891 365 aaKnown RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CLPSP04118 112 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 IGKV3-11P04433 115 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 IFNA6P05013 189 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 TMIGD3P0DMS9 266 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CD79AP11912 226 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 NR2C1P13056 603 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 GLULP15104 373 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF823P16415 610 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 MAOAP21397 527 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 PSMB6P28072 239 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 IL12BP29460 328 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 BDKRB2P30411 391 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CASRP41180 1078 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 NR0B1P51843 470 aaKnown RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 EFNB2P52799 333 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SLC26A5P58743 744 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CXADRP78310 365 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CTAG1AP78358 180 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 BLOC1S1P78537 153 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 IL13RA1P78552 427 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 DCDP81605 110 aaKnown RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 HHEXQ03014 270 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ACKR1Q16570 336 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 GUCA2BQ16661 112 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF260Q3ZCT1 412 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM128Q5BJH2 165 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 GLYATL3Q5SZD4 288 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 DCAF12L2Q5VW00 463 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 HLA-DQA1Q5Y7H0 255 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 DHRS7BQ6IAN0 325 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 FAAP20Q6NZ36 180 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF529Q6P280 563 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 DGAT2L6Q6ZPD8 337 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CFAP77Q6ZQR2 320 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 Q6ZSR6 202 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF627Q7L945 461 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 RD3Q7Z3Z2 195 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 BAP18Q8IXM2 172 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 GTPBP8Q8N3Z3 284 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 C12orf76Q8N812 135 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 OR4K17Q8NGC6 315 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 OR5D14Q8NGL3 314 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 OR13C3Q8NGS6 347 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 OR13C8Q8NGS7 320 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 PPP1R1CQ8WVI7 109 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ATOH1Q92858 354 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 DAZLQ92904 295 aaKnown RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 GCDHQ92947 438 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 TAAR8Q969N4 342 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 FBXW5Q969U6 566 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SMAD5Q99717 465 aaKnown RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 NPAS1Q99742 590 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 KXD1Q9BQD3 176 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ABHD6Q9BV23 337 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF471Q9BX82 626 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 B3GNT4Q9C0J1 378 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SYT4Q9H2B2 425 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CDIP1Q9H305 208 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM185BQ9H7F4 350 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNHG1-225ENST00000545920 BIN3Q9NQY0 253 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 SLC22A11Q9NSA0 550 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 ZFP57Q9NU63 452 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 HPF1Q9NWY4 346 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 CLEC1BQ9P126 229 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 PPP4R1LQ9P1A2 415 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 MSRAQ9UJ68 235 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms