RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 IFNA6P05013 189 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 ERCC1P07992 297 aaPredicted RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 CELA2BP08218 269 aaPredicted RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 LIPCP11150 499 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 PGAM2P15259 253 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 ZNF823P16415 610 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 VAMP1P23763 118 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 SLC6A9P48067 706 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 MMP16P51512 607 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 BLOC1S1P78537 153 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 AIMP2Q13155 320 aaKnown RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 UNC119Q13432 240 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 C1QL3Q5VWW1 255 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 OR10K2Q6IF99 312 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 UNQ6126/PRO20091Q6UXV3 157 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 GRINAQ7Z429 371 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 PAQR4Q8N4S7 273 aaPredicted RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 SLC25A36Q96CQ1 311 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 SAT2Q96F10 170 aaPredicted RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 FOXN4Q96NZ1 517 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 GAL3ST1Q99999 423 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 C8orf33Q9H7E9 229 aaPredicted RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 CNTD2Q9H8S5 307 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 BIN3Q9NQY0 253 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 ATPIF1Q9UII2 106 aa7.82□□□□□ -1.16
TDP1-204ENST00000545686 FBXO9Q9UK97 447 aaPredicted RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 KIAA0100Q14667 2235 aaKnown RBP7.82□□□□□ -1.16
TDP1-204ENST00000545686 TMEM269A0A1B0GVZ9 245 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TSPAN2O60636 221 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 MYOGP15173 224 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 AVPR2P30518 371 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CBX5P45973 191 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CAPZBP47756 277 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ARHGDIBP52566 201 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TDGQ13569 410 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TMEM128Q5BJH2 165 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 NKAPLQ5M9Q1 402 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 H3F3CQ6NXT2 135 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 RHOUQ7L0Q8 258 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 MDGA2Q7Z553 956 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 PARGQ86W56 976 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TMEM151BQ8IW70 566 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 SKA3Q8IX90 412 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ARRDC1Q8N5I2 433 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ZNF321PQ8N8H1 164 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 DMBX1Q8NFW5 382 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 OR1M1Q8NGA1 313 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CDCA3Q99618 268 aaPredicted RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 RTN4RQ9BZR6 473 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CHRNA10Q9GZZ6 450 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 RAB18Q9NP72 206 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CYTL1Q9NRR1 136 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 PNO1Q9NRX1 252 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 GPR27Q9NS67 375 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ZFP57Q9NU63 452 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 SLC5A6Q9Y289 635 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 COA3Q9Y2R0 106 aaPredicted RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 IGKV3D-11A0A0A0MRZ8 115 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 SPTY2D1-AS1A0A0U1RR47 76 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 C5orf51A6NDU8 294 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 EEF1E1-BLOC1S5C9J1V9 151 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 PRKNO60260 465 aaPredicted RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 NUDT14O95848 222 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 DDAH2O95865 285 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CHRM2P08172 466 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 GSTP1P09211 210 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 CD1CP29017 333 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CTHP32929 405 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 SERPINF1P36955 418 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 DAP3P51398 398 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 GPR85P60893 370 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 EIF5AP63241 154 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 MRPS21P82921 87 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 PJVKQ0ZLH3 352 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ZP4Q12836 540 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ZNF528Q3MIS6 628 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 VAX1Q5SQQ9 334 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 OTPQ5XKR4 325 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 OR52W1Q6IF63 320 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ZNF529Q6P280 563 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TMEM71Q6P5X7 295 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 POMZP3Q6PJE2 187 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 KCTD9Q7L273 389 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 DCXRQ7Z4W1 244 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CHST4Q8NCG5 386 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ADAD2Q8NCV1 583 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 OR10R2Q8NGX6 335 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 PAQR8Q8TEZ7 354 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ZNF721Q8TF20 911 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 CASTOR1Q8WTX7 329 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 NUDCD2Q8WVJ2 157 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 RNF133Q8WVZ7 376 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 ASB10Q8WXI3 467 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 NKD1Q969G9 470 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 SCGB3A2Q96PL1 93 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 TBL1XR1Q9BZK7 514 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 OR8D2Q9GZM6 311 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 MTIF3Q9H2K0 278 aaKnown RBP7.81□□□□□ -1.16
TDP1-204ENST00000545686 IFT22Q9H7X7 185 aa7.81□□□□□ -1.16
TDP1-204ENST00000545686 UCK1Q9HA47 277 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms