RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 NDE1Q9NXR1 346 aa17.78■□□□□ 0.44
SCARB1-210ENST00000545493 CYB5R1Q9UHQ9 305 aa17.78■□□□□ 0.44
SCARB1-210ENST00000545493 TMCC3Q9ULS5 477 aa17.78■□□□□ 0.44
SCARB1-210ENST00000545493 PPP1R3CQ9UQK1 317 aa17.78■□□□□ 0.44
SCARB1-210ENST00000545493 TCRBV5S2A0A599 114 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 IQCF6A8MYZ5 107 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 SBK2P0C263 348 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 ACSM4P0C7M7 580 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 PSKH1P11801 424 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 GATA3P23771 443 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 NOS3P29474 1203 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 HILS1P60008 231 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 MXRA7P84157 204 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 SPATS1Q496A3 300 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 BHLHE23Q8NDY6 225 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 DEFB108BQ8NET1 73 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 OR8G5Q8NG78 346 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 OR52E2Q8NGJ4 325 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 OR5L1Q8NGL2 311 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 OR8D4Q8NGM9 314 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 ZNF420Q8TAQ5 688 aaPredicted RBP17.77■□□□□ 0.44
SCARB1-210ENST00000545493 ZFAND2BQ8WV99 257 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 MEGF10Q96KG7 1140 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 C1QTNF5Q9BXJ0 243 aa17.77■□□□□ 0.44
SCARB1-210ENST00000545493 PATZ1Q9HBE1 687 aaKnown RBP17.77■□□□□ 0.44
SCARB1-210ENST00000545493 PPIAL4EA0A075B759 164 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 PPIAL4CA0A0B4J2A2 164 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 A8MXK9 166 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 PPIAL4DF5H284 164 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 H0YL77 283 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 TMEM178BH3BS89 294 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 BHLHE40O14503 412 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 SURF4O15260 269 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 FOXH1O75593 365 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 PPIAL4FP0DN26 164 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 ANOS1P23352 680 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 TRAP1Q12931 704 aaKnown RBP17.76■□□□□ 0.43
SCARB1-210ENST00000545493 SLC35F1Q5T1Q4 408 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF770Q6IQ21 691 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-210ENST00000545493 USP43Q70EL4 1123 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 LRRC28Q86X40 367 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-210ENST00000545493 ATG16L2Q8NAA4 619 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF418Q8TF45 676 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-210ENST00000545493 MAP6Q96JE9 813 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 DDOQ99489 341 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 SLC6A7Q99884 636 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 ATF6BQ99941 703 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 SLC30A2Q9BRI3 323 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 C7orf69Q9H7B7 122 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 ACTR3BQ9P1U1 418 aa17.76■□□□□ 0.43
SCARB1-210ENST00000545493 A0A1B0GWJ7 208 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 CEACAM18A8MTB9 384 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 HAX1O00165 279 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 IDH3BO43837 385 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 PYCR1P32322 319 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 RPS27P42677 84 aaKnown RBP17.75■□□□□ 0.43
SCARB1-210ENST00000545493 HMGA2P52926 109 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 SLC36A3Q495N2 470 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 LYPD4Q6UWN0 246 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 FITM2Q8N6M3 262 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 CYB561A3Q8NBI2 242 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 OR52L1Q8NGH7 329 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 OR10S1Q8NGN2 331 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 ZNRF4Q8WWF5 429 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF582Q96NG8 517 aaPredicted RBP17.75■□□□□ 0.43
SCARB1-210ENST00000545493 PITX2Q99697 317 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 MMP26Q9NRE1 261 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 VNN3Q9NY84 501 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 PCDHB10Q9UN67 800 aa17.75■□□□□ 0.43
SCARB1-210ENST00000545493 F5H5K5 113 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 TNFRSF11BO00300 401 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 KRT36O76013 467 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 CYB5R3P00387 301 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-210ENST00000545493 HLA-DQA2P01906 255 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 SELEP16581 610 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 MDH2P40926 338 aaKnown RBP17.74■□□□□ 0.43
SCARB1-210ENST00000545493 PPP1R8Q12972 351 aaKnown RBP17.74■□□□□ 0.43
SCARB1-210ENST00000545493 GK2Q14410 553 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-210ENST00000545493 RPL13AP3Q6NVV1 102 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 KLHL36Q8N4N3 616 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 OR13G1Q8NGZ3 307 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 NANPQ8TBE9 248 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 TRIM15Q9C019 465 aa17.74■□□□□ 0.43
SCARB1-210ENST00000545493 POLR3KQ9Y2Y1 108 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-210ENST00000545493 IGHV3-64DA0A0J9YX35 117 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 F5H5P2 479 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 TRAPPC2LH3BP13 241 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 SLC6A9P48067 706 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 LCN8Q6JVE9 175 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 SLC27A4Q6P1M0 643 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 NAA40Q86UY6 237 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 MOGAT3Q86VF5 341 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 SLC37A3Q8NCC5 494 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 OR2AJ1Q8NGZ0 328 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 ESM1Q9NQ30 184 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 IL20Q9NYY1 176 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 KCNG2Q9UJ96 466 aa17.73■□□□□ 0.43
SCARB1-210ENST00000545493 TVP23AA6NH52 213 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 M0R135 149 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 CCNB2O95067 398 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms