RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TEX30Q5JUR7 227 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 CORO6Q6QEF8 472 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 USP51Q70EK9 711 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 CYB561A3Q8NBI2 242 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 YIPF5Q969M3 257 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 RAB39BQ96DA2 213 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 CMBLQ96DG6 245 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 ZNF582Q96NG8 517 aaPredicted RBP10.05□□□□□ -0.8
HDAC4-216ENST00000544989 NIPSNAP1Q9BPW8 284 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 HCAR1Q9BXC0 346 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 C1QTNF5Q9BXJ0 243 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 NMNAT2Q9BZQ4 307 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 FN3KQ9H479 309 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 ARMC1Q9NVT9 282 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 STARD10Q9Y365 291 aa10.05□□□□□ -0.8
HDAC4-216ENST00000544989 LRP5LA4QPB2 252 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 ZSCAN5BA6NJL1 495 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 F5H5K5 113 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 GPANK1O95872 356 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 APOC1P02654 83 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 FAM157CP0CG43 387 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 OSMP13725 252 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 SPI1P17947 270 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 SLC15A1P46059 708 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 ENTPD1P49961 510 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 CDH15P55291 814 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 TNFAIP6P98066 277 aaPredicted RBP10.04□□□□□ -0.8
HDAC4-216ENST00000544989 CRMP1Q14194 572 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 PCK2Q16822 640 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 ZNF362Q5T0B9 420 aaPredicted RBP10.04□□□□□ -0.8
HDAC4-216ENST00000544989 COLCA1Q6ZS62 124 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 TEX29Q8N6K0 151 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 ATG16L2Q8NAA4 619 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 OR13G1Q8NGZ3 307 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 SLC7A6Q92536 515 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 CADM1Q9BY67 442 aaKnown RBP10.04□□□□□ -0.8
HDAC4-216ENST00000544989 OPA3Q9H6K4 179 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 SP140LQ9H930 580 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 DDX28Q9NUL7 540 aaKnown RBP10.04□□□□□ -0.8
HDAC4-216ENST00000544989 MRPL22Q9NWU5 206 aaKnown RBP10.04□□□□□ -0.8
HDAC4-216ENST00000544989 KIF17Q9P2E2 1029 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 IL19Q9UHD0 177 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 COMMD3-BMI1R4GMX3 469 aa10.04□□□□□ -0.8
HDAC4-216ENST00000544989 M0R135 149 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 CDC14BO60729 498 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 DBHP09172 617 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 ACSM4P0C7M7 580 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 FCGR1AP12314 374 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 PYCR1P32322 319 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 THBS2P35442 1172 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 DVL1P1P54792 670 aaPredicted RBP10.03□□□□□ -0.8
HDAC4-216ENST00000544989 TAF13Q15543 124 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 TRIP10Q15642 601 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 SHQ1Q6PI26 577 aaKnown RBP10.03□□□□□ -0.8
HDAC4-216ENST00000544989 DRAM2Q6UX65 266 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 CFAP77Q6ZQR2 320 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 RHOUQ7L0Q8 258 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 CXXC5Q7LFL8 322 aaKnown RBP10.03□□□□□ -0.8
HDAC4-216ENST00000544989 SHFQ7M4L6 423 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 GLCCI1Q86VQ1 547 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 OR2Z1Q8NG97 314 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 OR9Q1Q8NGQ5 310 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 OR6K6Q8NGW6 343 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 OR4Q3Q8NH05 313 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 CLDND2Q8NHS1 167 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 CCL17Q92583 94 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 ZNF799Q96GE5 643 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 PLEKHA8Q96JA3 519 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 PRRG3Q9BZD7 231 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 SLC22A4Q9H015 551 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 TOR3AQ9H497 397 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 MSL2Q9HCI7 577 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 PNRC2Q9NPJ4 139 aaKnown RBP10.03□□□□□ -0.8
HDAC4-216ENST00000544989 ENOPH1Q9UHY7 261 aa10.03□□□□□ -0.8
HDAC4-216ENST00000544989 MALRD1Q5VYJ5 2156 aa10.02□□□□□ -0.8
HDAC4-216ENST00000544989 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 IQCF6A8MYZ5 107 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF878C9JN71 531 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PRR23D1E9PI22 279 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF593O00488 134 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PRODHO43272 600 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 CIB2O75838 187 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 GLCEO94923 617 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 LCATP04180 440 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PRR23D2P0DMB1 279 aaPredicted RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 SRD5A1P18405 259 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 CPT2P23786 658 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 POU1F1P28069 291 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 SLC6A9P48067 706 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 SRP9P49458 86 aaKnown RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 GRB2P62993 217 aaKnown RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 SCGB2A2Q13296 93 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 CCNIQ14094 377 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 GINS1Q14691 196 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 C1orf146Q5VVC0 180 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 OTPQ5XKR4 325 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PGAP1Q75T13 922 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms