RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	BRWD1-AS2	P59051	145 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	NAA20	P61599	178 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	MYBPC1	Q00872	1141 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	POU3F1	Q03052	451 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	REL	Q04864	619 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	PPP1R8	Q12972	351 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	QPRT	Q15274	297 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	UAP1	Q16222	522 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	DUSP5	Q16690	384 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	IMPG1	Q17R60	797 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	UNC50	Q53HI1	259 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF678	Q5SXM1	525 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	TEX35	Q5T0J7	233 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	REP15	Q6BDI9	236 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR4A47	Q6IF82	309 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	NOXRED1	Q6NXP6	359 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	CORO6	Q6QEF8	472 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	GPRIN3	Q6ZVF9	776 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	RPS27L	Q71UM5	84 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	SVOPL	Q8N434	492 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	NUP37	Q8NFH4	326 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR52E4	Q8NGH9	312 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	CDC26	Q8NHZ8	85 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	FAM46B	Q96A09	425 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	GIMAP5	Q96F15	307 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	CHMP6	Q96FZ7	201 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	C16orf58	Q96GQ5	468 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	MS4A4E	Q96PG1	132 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF317	Q96PQ6	595 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	KLHDC3	Q9BQ90	382 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	URM1	Q9BTM9	101 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	EBPL	Q9BY08	206 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	LAT2	Q9GZY6	243 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	TSPYL1	Q9H0U9	437 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	DPH5	Q9H2P9	285 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	CDC42EP4	Q9H3Q1	356 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	RIMS4	Q9H426	269 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF442	Q9H7R0	627 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	GPN1	Q9HCN4	374 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZCCHC3	Q9NUD5	404 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	DDX28	Q9NUL7	540 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	ACER3	Q9NUN7	267 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	ARMCX1	Q9P291	453 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	FOXA2	Q9Y261	457 aa	Predicted RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLC9A8	Q9Y2E8	581 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	UTP11	Q9Y3A2	253 aa	Known RBP	5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	SAR1B	Q9Y6B6	198 aa		5.14	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR6C65	A6NJZ3	312 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585		A8MT66	165 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	KLF11	O14901	512 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	SSX5	O60225	188 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	ATP6V1G1	O75348	118 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	FSHB	P01225	129 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	HMGN2	P05204	90 aa	Known RBP	5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	MSMB	P08118	114 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	MAGEA12	P43365	314 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	GPR6	P46095	362 aa	Predicted RBP	5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	EVX1	P49640	407 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	KRTAP10-2	P60368	255 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	UBE2N	P61088	152 aa	Known RBP	5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	SSBP2	P81877	361 aa	Predicted RBP	5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	H3F3A	P84243	136 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	NAAA	Q02083	359 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	MERTK	Q12866	999 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	CCNJ	Q5T5M9	372 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	C9orf135	Q5VTT2	229 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	RBMS3	Q6XE24	437 aa	Known RBP	5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	GPR141	Q7Z602	305 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLC22A9	Q8IVM8	553 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	NATD1	Q8N6N6	113 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	NRAC	Q8N912	160 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	ZNF114	Q8NC26	417 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	OR51F2	Q8NH61	342 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	NANP	Q8TBE9	248 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	DCAKD	Q8WVC6	231 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMED6	Q8WW62	240 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	RDH5	Q92781	318 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	RPL36AL	Q969Q0	106 aa	Known RBP	5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	PPCDC	Q96CD2	204 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	TSSK2	Q96PF2	358 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLC38A2	Q96QD8	506 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	REEP4	Q9H6H4	257 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	SLC7A10	Q9NS82	523 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	MED29	Q9NX70	200 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	PTTG2	Q9NZH5	202 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMEM181	Q9P2C4	612 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	TIMM22	Q9Y584	194 aa		5.13	□□□□□ -1.59
CPSF7-222	ENST00000544585	TRAV18	A0A075B6X5	111 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	IGHV1-18	A0A0C4DH31	117 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	TMEM129	A0AVI4	362 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	SH3PXD2B	A1X283	911 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	ANKRD61	A6NGH8	418 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585		J3QLI3	93 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	hCG_2039718	K7EN88	272 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	KRT33A	O76009	404 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	H6PD	O95479	791 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	ADRA2A	P08913	450 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	ARRB2	P32121	409 aa		5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	NKX2-1	P43699	371 aa	Predicted RBP	5.12	□□□□□ -1.59
CPSF7-222	ENST00000544585	GLIPR1	P48060	266 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms