RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 OPRL1P41146 370 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 ALDH3B1P43353 468 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 NUDT6P53370 316 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 SELENOVP59797 346 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 ELF3P78545 371 aaPredicted RBP16.34■□□□□ 0.21
DDX55-211ENST00000544429 PSG7Q13046 419 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 EIF2B1Q14232 305 aaKnown RBP16.34■□□□□ 0.21
DDX55-211ENST00000544429 CLEC12BQ2HXU8 276 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 SLC25A30Q5SVS4 291 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 FBXW12Q6X9E4 464 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 SLC16A9Q7RTY1 509 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 ZNF799Q96GE5 643 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 KCNJ15Q99712 375 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 RAB1BQ9H0U4 201 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 DYNLRB1Q9NP97 96 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 TAAR3PQ9P1P4 343 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 KLHDC2Q9Y2U9 406 aa16.34■□□□□ 0.21
DDX55-211ENST00000544429 ERICH4A6NGS2 130 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 SLC22A31A6NKX4 558 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 CASQ2O14958 399 aaPredicted RBP16.33■□□□□ 0.2
DDX55-211ENST00000544429 LY6HO94772 140 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 RAC2P15153 192 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 KITLGP21583 273 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 GCH1P30793 250 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 TPTEP56180 551 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 CDC42P60953 191 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 ZIK1Q3SY52 487 aaPredicted RBP16.33■□□□□ 0.2
DDX55-211ENST00000544429 LCN1P1Q5VSP4 162 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 DRAM2Q6UX65 266 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 PRSS45Q7RTY3 260 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 GID4Q8IVV7 300 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 NEU4Q8WWR8 484 aaPredicted RBP16.33■□□□□ 0.2
DDX55-211ENST00000544429 UBE2FQ969M7 185 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 SPTSSAQ969W0 71 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 HAVCR1Q96D42 359 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 RDH12Q96NR8 316 aa16.33■□□□□ 0.2
DDX55-211ENST00000544429 VRK1Q99986 396 aaPredicted RBP16.33■□□□□ 0.2
DDX55-211ENST00000544429 A0A1W2PPW3 197 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 C17orf100A8MU93 164 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 SSX4O60224 188 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 LYNP07948 512 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 ADH4P08319 380 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 NAT2P11245 290 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 CR1P17927 2039 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 GABRB1P18505 474 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 NAA10P41227 235 aaPredicted RBP16.32■□□□□ 0.2
DDX55-211ENST00000544429 RPS7P62081 194 aaKnown RBP16.32■□□□□ 0.2
DDX55-211ENST00000544429 SNRPGP62308 76 aaKnown RBP16.32■□□□□ 0.2
DDX55-211ENST00000544429 GRB2P62993 217 aaKnown RBP16.32■□□□□ 0.2
DDX55-211ENST00000544429 MOGQ16653 247 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 ALKBH6Q3KRA9 238 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 ZNF525Q8N782 197 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 OR5L1Q8NGL2 311 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 FAM81AQ8TBF8 368 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 COPS4Q9BT78 406 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 ADGRL4Q9HBW9 690 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 C8orf4Q9NR00 106 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 NKIRAS2Q9NYR9 191 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 CGGBP1Q9UFW8 167 aaPredicted RBP16.32■□□□□ 0.2
DDX55-211ENST00000544429 GPR160Q9UJ42 338 aa16.32■□□□□ 0.2
DDX55-211ENST00000544429 TRIM64A6NGJ6 449 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 TRIM64BA6NI03 449 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 SLC16A6O15403 523 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 PEX2P28328 305 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 HTR1FP30939 366 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 SLC15A1P46059 708 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 DSCR9P59020 149 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 TNK1Q13470 666 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 NKPD1Q17RQ9 610 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 SNAI3Q3KNW1 292 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 PACRGLQ8N7B6 248 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 GTF3AQ92664 365 aaKnown RBP16.31■□□□□ 0.2
DDX55-211ENST00000544429 CMBLQ96DG6 245 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 ZNF582Q96NG8 517 aaPredicted RBP16.31■□□□□ 0.2
DDX55-211ENST00000544429 TPK1Q9H3S4 243 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 DCLRE1BQ9H816 532 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 MYOZ1Q9NP98 299 aaPredicted RBP16.31■□□□□ 0.2
DDX55-211ENST00000544429 CENPMQ9NSP4 180 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 FAM118AQ9NWS6 357 aa16.31■□□□□ 0.2
DDX55-211ENST00000544429 WARS2Q9UGM6 360 aaKnown RBP16.31■□□□□ 0.2
DDX55-211ENST00000544429 PURGQ9UJV8 347 aaKnown RBP16.31■□□□□ 0.2
DDX55-211ENST00000544429 TEP1Q99973 2627 aaKnown RBP16.31■□□□□ 0.2
DDX55-211ENST00000544429 ZANQ9Y493 2812 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 YLPM1P49750 1951 aaKnown RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 A0A096LNT2 108 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 A0A1B0GWJ7 208 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 C5orf63A6NC05 138 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 PRR32B1ATL7 298 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 CSF3P09919 207 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 FOSL1P15407 271 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 LIPAP38571 399 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 HCCSP53701 268 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 ROM1Q03395 351 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 TMED1Q13445 227 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 HLXQ14774 488 aaPredicted RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 TRIP10Q15642 601 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 OCLNQ16625 522 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 OGFRL1Q5TC84 451 aaPredicted RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 LPCAT4Q643R3 524 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms