RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 KLF13Q9Y2Y9 288 aaPredicted RBP12.03□□□□□ -0.48
HCFC2-202ENST00000544223 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 AIPO00170 330 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 NPR2P20594 1047 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 CD82P27701 267 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 BCAP31P51572 246 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 POU4F3Q15319 338 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 ABLIM2Q6H8Q1 611 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 FDX2Q6P4F2 183 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 LRRC28Q86X40 367 aaPredicted RBP12.03□□□□□ -0.48
HCFC2-202ENST00000544223 HAS2Q92819 552 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 PRRG4Q9BZD6 226 aa12.03□□□□□ -0.48
HCFC2-202ENST00000544223 CCL2P13500 99 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 GUCA1AP43080 201 aaPredicted RBP12.02□□□□□ -0.48
HCFC2-202ENST00000544223 CCR9P51686 369 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 RRADP55042 308 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 RAB25P57735 213 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 HGFACQ04756 655 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 CDC20Q12834 499 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 ZNF57Q68EA5 555 aaPredicted RBP12.02□□□□□ -0.48
HCFC2-202ENST00000544223 ZFP62Q8NB50 900 aaPredicted RBP12.02□□□□□ -0.48
HCFC2-202ENST00000544223 OR5M9Q8NGP3 310 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 OR1J2Q8NGS2 313 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 SYNPRQ8TBG9 265 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 NPRL2Q8WTW4 380 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 ACOT12Q8WYK0 555 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 CPNE4Q96A23 557 aaPredicted RBP12.02□□□□□ -0.48
HCFC2-202ENST00000544223 SLC7A10Q9NS82 523 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 PLEK2Q9NYT0 353 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 CAMK2AQ9UQM7 478 aa12.02□□□□□ -0.48
HCFC2-202ENST00000544223 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.48
HCFC2-202ENST00000544223 PCDHGA9Q9Y5G4 932 aaKnown RBP12.02□□□□□ -0.48
HCFC2-202ENST00000544223 CYTIPO60759 359 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 SLC19A2O60779 497 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 KRT33AO76009 404 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 PDGFAP04085 211 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 ATRXP46100 2492 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 PITPNBP48739 271 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.49
HCFC2-202ENST00000544223 C10orf128Q5T292 105 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 KRT74Q7RTS7 529 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 NUFIP2Q7Z417 695 aaKnown RBP12.02□□□□□ -0.49
HCFC2-202ENST00000544223 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 OR2AE1Q8NHA4 323 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 ZCCHC4Q9H5U6 513 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 GPR84Q9NQS5 396 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 HHLA2Q9UM44 414 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
HCFC2-202ENST00000544223 SYT7O43581 403 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 KDM4BO94953 1096 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 MAPK3P27361 379 aaPredicted RBP12.01□□□□□ -0.49
HCFC2-202ENST00000544223 TALDO1P37837 337 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 MMP16P51512 607 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 GTF3C1Q12789 2109 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 GLYATL3Q5SZD4 288 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 TRIQKQ629K1 86 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 RTN4RL2Q86UN3 420 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 GCNT2Q8N0V5 402 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 JAGN1Q8N5M9 183 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 OR13C9Q8NGT0 318 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 SLITRK2Q9H156 845 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 A0A1B0GTI1 187 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF503-AS2A6NEH8 195 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 CFL1P23528 166 aaKnown RBP12.01□□□□□ -0.49
HCFC2-202ENST00000544223 SCN1BQ07699 218 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 HDDC2Q7Z4H3 204 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 GDPD1Q8N9F7 314 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 THAP7Q9BT49 309 aaPredicted RBP12.01□□□□□ -0.49
HCFC2-202ENST00000544223 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
HCFC2-202ENST00000544223 ZMAT3Q9HA38 289 aaKnown RBP12.01□□□□□ -0.49
HCFC2-202ENST00000544223 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
HCFC2-202ENST00000544223 MRPS18CQ9Y3D5 142 aaKnown RBP12.01□□□□□ -0.49
HCFC2-202ENST00000544223 MEIOCA2RUB1 952 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 ISPDA4D126 451 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 MEIS3P1A6NDR6 274 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 MRPL33O75394 65 aaKnown RBP12□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF32P17041 273 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 KIR2DL3P43628 341 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 ELMOD2Q8IZ81 293 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 OR52N4Q8NGI2 321 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 FAM46BQ96A09 425 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 SCMH1Q96GD3 660 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 LYZL4Q96KX0 146 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 GPR35Q9HC97 309 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 ELF5Q9UKW6 265 aaPredicted RBP12□□□□□ -0.49
HCFC2-202ENST00000544223 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 TRGV5A0A0B4J1U4 118 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 PDCD5O14737 125 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 CDK2P24941 298 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 FAM109AQ8N4B1 249 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 C19orf18Q8NEA5 215 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
HCFC2-202ENST00000544223 NEURL2Q9BR09 285 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 B3GNT4Q9C0J1 378 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
HCFC2-202ENST00000544223 CDV3Q9UKY7 258 aaKnown RBP12□□□□□ -0.49
HCFC2-202ENST00000544223 HNRNPCP07910 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
HCFC2-202ENST00000544223 POU3F4P49335 361 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms