RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 OR52D1Q9H346 318 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 GCM1Q9NP62 436 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 DCAF16Q9NXF7 216 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 B9D1Q9UPM9 204 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 V9GYQ6 96 aa11.05□□□□□ -0.64
RTN3-213ENST00000543552 IQCF6A8MYZ5 107 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 F5H0A9 414 aaPredicted RBP11.04□□□□□ -0.64
RTN3-213ENST00000543552 ATP8B1O43520 1251 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 FSTL3O95633 263 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 HLA-DQA2P01906 255 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 IRF2P14316 349 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 RPS2P15880 293 aaKnown RBP11.04□□□□□ -0.64
RTN3-213ENST00000543552 ZNF12P17014 697 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
RTN3-213ENST00000543552 ZNF154Q13106 437 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 HLXQ14774 488 aaPredicted RBP11.04□□□□□ -0.64
RTN3-213ENST00000543552 MEP1BQ16820 701 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 ZNF181Q2M3W8 571 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 OTPQ5XKR4 325 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 BTNL3Q6UXE8 466 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 NLRC3Q7RTR2 1065 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 PGAM4Q8N0Y7 254 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 LINC00471Q8N535 108 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 DEFB108BQ8NET1 73 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 OR52L1Q8NGH7 329 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 MEGF10Q96KG7 1140 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 TSSK2Q96PF2 358 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 SIGLEC11Q96RL6 698 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 ATF6BQ99941 703 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 SLC30A2Q9BRI3 323 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 C1QTNF5Q9BXJ0 243 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 SRA1Q9HD15 236 aaKnown RBP11.04□□□□□ -0.64
RTN3-213ENST00000543552 RPRD1BQ9NQG5 326 aaKnown RBP11.04□□□□□ -0.64
RTN3-213ENST00000543552 TMEM100Q9NV29 134 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 MIOXQ9UGB7 285 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 NUP50Q9UKX7 468 aa11.04□□□□□ -0.64
RTN3-213ENST00000543552 CEACAM18A8MTB9 384 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 DCTN6O00399 190 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 SNX3O60493 162 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 KRT36O76013 467 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 SEMG1P04279 462 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 HIST1H1CP16403 213 aaKnown RBP11.03□□□□□ -0.64
RTN3-213ENST00000543552 ERFP50548 548 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 TPTEP56180 551 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 UBA52P62987 128 aaKnown RBP11.03□□□□□ -0.64
RTN3-213ENST00000543552 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 CORO6Q6QEF8 472 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 C16orf89Q6UX73 402 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 ZNF620Q6ZNG0 422 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 COLCA1Q6ZS62 124 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 OR6V1Q8N148 313 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 CELF2-AS1Q8N7Q2 184 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 OR11L1Q8NGX0 322 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 SPTSSAQ969W0 71 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
RTN3-213ENST00000543552 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 IL1RAPQ9NPH3 570 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 CYB5R1Q9UHQ9 305 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
RTN3-213ENST00000543552 F5H5K5 113 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 ARPC2O15144 300 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 GPANK1O95872 356 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 ACSM4P0C7M7 580 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 ZNF823P16415 610 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 RRM2P31350 389 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 GSSP48637 474 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 MNAT1P51948 309 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 RAD23AP54725 363 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 GNB2P62879 340 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 MXRA7P84157 204 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
RTN3-213ENST00000543552 TSPAN31Q12999 210 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 LRRN1Q6UXK5 716 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 PGAP1Q75T13 922 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 OR8B3Q8NGG8 313 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 OR4C15Q8NGM1 316 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 SPRYD4Q8WW59 207 aaPredicted RBP11.02□□□□□ -0.65
RTN3-213ENST00000543552 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 DVL3Q92997 716 aaPredicted RBP11.02□□□□□ -0.65
RTN3-213ENST00000543552 NEIL1Q96FI4 390 aaPredicted RBP11.02□□□□□ -0.65
RTN3-213ENST00000543552 OR8B2Q96RD0 313 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 MMP26Q9NRE1 261 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 TAGLN3Q9UI15 199 aa11.02□□□□□ -0.65
RTN3-213ENST00000543552 A0A1B0GWJ7 208 aa11.01□□□□□ -0.65
RTN3-213ENST00000543552 F5H5P2 479 aa11.01□□□□□ -0.65
RTN3-213ENST00000543552 TRAPPC2LH3BP13 241 aa11.01□□□□□ -0.65
RTN3-213ENST00000543552 MLNRO43193 412 aa11.01□□□□□ -0.65
RTN3-213ENST00000543552 DCTN3O75935 186 aa11.01□□□□□ -0.65
RTN3-213ENST00000543552 LCATP04180 440 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms